RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 CDPF1Q6NVV7 123 aa12.02□□□□□ -0.49
MBD4-201ENST00000249910 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.02□□□□□ -0.49
MBD4-201ENST00000249910 HIPK2Q9H2X6 1198 aa12.02□□□□□ -0.49
MBD4-201ENST00000249910 C15orf61A6NNL5 157 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 CD1BP29016 333 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 GNB2P62879 340 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 EFNB3Q15768 340 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 TMEM41BQ5BJD5 291 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 ZFYVE26Q68DK2 2539 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 MAP1LC3B2A6NCE7 125 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 ARG1P05089 322 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 SRP19P09132 144 aaKnown RBP12.01□□□□□ -0.49
MBD4-201ENST00000249910 KIR2DS2P43631 304 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 FBXL19-AS1Q494R0 122 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 FFAR4Q5NUL3 377 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 C15orf54Q8N8G6 183 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 FAM216AQ8WUB2 273 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 MAP1LC3BQ9GZQ8 125 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 SLC39A9Q9NUM3 307 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 NAV3Q8IVL0 2385 aa12.01□□□□□ -0.49
MBD4-201ENST00000249910 A0A1B0GW64 132 aa12□□□□□ -0.49
MBD4-201ENST00000249910 HBE1P02100 147 aa12□□□□□ -0.49
MBD4-201ENST00000249910 CD81P60033 236 aa12□□□□□ -0.49
MBD4-201ENST00000249910 ATP6V1FQ16864 119 aa12□□□□□ -0.49
MBD4-201ENST00000249910 ZNF429Q86V71 674 aa12□□□□□ -0.49
MBD4-201ENST00000249910 LHX4Q969G2 390 aa12□□□□□ -0.49
MBD4-201ENST00000249910 TMEM14BQ9NUH8 114 aa12□□□□□ -0.49
MBD4-201ENST00000249910 CELSR1Q9NYQ6 3014 aa12□□□□□ -0.49
MBD4-201ENST00000249910 CSMD2Q7Z408 3487 aa12□□□□□ -0.49
MBD4-201ENST00000249910 ZNF672Q499Z4 452 aaPredicted RBP12□□□□□ -0.49
MBD4-201ENST00000249910 Q8N7P7 452 aa12□□□□□ -0.49
MBD4-201ENST00000249910 OR10G4Q8NGN3 311 aa12□□□□□ -0.49
MBD4-201ENST00000249910 OR10G9Q8NGN4 311 aa12□□□□□ -0.49
MBD4-201ENST00000249910 OR10G7Q8NGN6 311 aa12□□□□□ -0.49
MBD4-201ENST00000249910 ATG101Q9BSB4 218 aa12□□□□□ -0.49
MBD4-201ENST00000249910 PARD6GQ9BYG4 376 aaPredicted RBP12□□□□□ -0.49
MBD4-201ENST00000249910 SPG11Q96JI7 2443 aa12□□□□□ -0.49
MBD4-201ENST00000249910 FLNCQ14315 2725 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 TRAV1-1A0A0B4J248 108 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 FAM90A9PA6NNJ1 464 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 HSPE1P61604 102 aaKnown RBP11.99□□□□□ -0.49
MBD4-201ENST00000249910 RAB11AP62491 216 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 ZNF506Q5JVG8 444 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 ETFRF1Q6IPR1 90 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 C11orf42Q8N5U0 333 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 ZNF709Q8N972 641 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 OR52E5Q8NH55 327 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 MBD3L1Q8WWY6 194 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 OR51B2Q9Y5P1 312 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 IGHV3-72A0A0B4J1Y9 119 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 HRASP01112 189 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 SAA1P0DJI8 122 aaPredicted RBP11.99□□□□□ -0.49
MBD4-201ENST00000249910 HNF1AP20823 631 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 RTL8BQ17RB0 113 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 ZNF833PQ6ZTB9 187 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 GATAD1Q8WUU5 269 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 ADTRPQ96IZ2 230 aa11.99□□□□□ -0.49
MBD4-201ENST00000249910 CRYBG3Q68DQ2 2970 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 A0A1W2PPE2 198 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 H3BQ15 152 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 J3QR06 171 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 RBX1P62877 108 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 VWC2Q2TAL6 325 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 CENPVQ7Z7K6 275 aaPredicted RBP11.98□□□□□ -0.49
MBD4-201ENST00000249910 OR10W1Q8NGF6 305 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 C22orf15Q8WYQ4 148 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 PATZ1Q9HBE1 687 aaKnown RBP11.98□□□□□ -0.49
MBD4-201ENST00000249910 KAAG1Q9UBP8 84 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 LOC102723971A0A1B0GUV8 181 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 E7EUB6 86 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 H0YJW9 148 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 HSPB1P04792 205 aaKnown RBP11.98□□□□□ -0.49
MBD4-201ENST00000249910 BCL2P10415 239 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 MDKP21741 143 aaPredicted RBP11.98□□□□□ -0.49
MBD4-201ENST00000249910 S100A2P29034 98 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 MOB3BQ86TA1 216 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 BEND2Q8NDZ0 799 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 HARBI1Q96MB7 349 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 TMEM208Q9BTX3 173 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 FOXA2Q9Y261 457 aaPredicted RBP11.98□□□□□ -0.49
MBD4-201ENST00000249910 CACNA1BQ00975 2339 aa11.98□□□□□ -0.49
MBD4-201ENST00000249910 PRSS46E5RG02 174 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 CA2P00918 260 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 DLX6P56179 175 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 GAMTQ14353 236 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 KHDC3LQ587J8 217 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 HIST1H2BAQ96A08 127 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 RITA1Q96K30 269 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 SMCO4Q9NRQ5 59 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 TIMM9Q9Y5J7 89 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 ZNF727A8MUV8 499 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 SOD3P08294 240 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 NPSP0C0P6 89 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 IGHV1-8P0DP01 117 aa11.97□□□□□ -0.49
MBD4-201ENST00000249910 PDLIM3Q53GG5 364 aaPredicted RBP11.97□□□□□ -0.49
MBD4-201ENST00000249910 SSMEM1Q8WWF3 244 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms