RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 SNRNP40Q96DI7 357 aaKnown RBP17.95■□□□□ 0.46
RNF39-201ENST00000244360 MAP1BP46821 2468 aaKnown RBP17.95■□□□□ 0.46
RNF39-201ENST00000244360 TRAV38-1A0A0B4J264 116 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 K7ENP7 123 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 GCGP01275 180 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 IL6RP08887 468 aaPredicted RBP17.94■□□□□ 0.46
RNF39-201ENST00000244360 DDTP30046 118 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 GNB1P62873 340 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 MEF2CQ06413 473 aaPredicted RBP17.94■□□□□ 0.46
RNF39-201ENST00000244360 FOXC1Q12948 553 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 TREML4Q6UXN2 200 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 SH3BGRL2Q9UJC5 107 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 ZGRF1Q86YA3 2104 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 CXorf1O96002 111 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 GNG10P50151 68 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 HSPE1P61604 102 aaKnown RBP17.94■□□□□ 0.46
RNF39-201ENST00000244360 CST9LP1Q5W188 147 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 REC114Q7Z4M0 266 aa17.94■□□□□ 0.46
RNF39-201ENST00000244360 TET2Q6N021 2002 aaPredicted RBP17.94■□□□□ 0.46
RNF39-201ENST00000244360 ABHD12Q8N2K0 398 aa17.93■□□□□ 0.46
RNF39-201ENST00000244360 FUT9Q9Y231 359 aa17.93■□□□□ 0.46
RNF39-201ENST00000244360 STAG3L2P0CL84 134 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 STAG3L3P0CL85 134 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 PRR30Q53SZ7 412 aaPredicted RBP17.92■□□□□ 0.46
RNF39-201ENST00000244360 C14orf144Q96I85 54 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 SLC25A10Q9UBX3 287 aaPredicted RBP17.92■□□□□ 0.46
RNF39-201ENST00000244360 CT45A6P0DMU7 189 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 CT45A5P0DMU8 189 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 CT45A7P0DMV0 189 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 GZMBP10144 247 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 DEFA4P12838 97 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 PAX1P15863 534 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 NDUFB7P17568 137 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 ATP5G3P48201 142 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 FOXL1Q12952 345 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 TMEM18Q96B42 140 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 GAL3ST2Q9H3Q3 398 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 MS4A5Q9H3V2 200 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 SAP30LQ9HAJ7 183 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 PXMP4Q9Y6I8 212 aa17.92■□□□□ 0.46
RNF39-201ENST00000244360 TMEM178BH3BS89 294 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 TMEM144Q7Z5S9 345 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 ZCCHC24Q8N2G6 241 aaKnown RBP17.91■□□□□ 0.46
RNF39-201ENST00000244360 MGST2Q99735 147 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 GGTLC1Q9BX51 225 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 LSM4Q9Y4Z0 139 aaKnown RBP17.91■□□□□ 0.46
RNF39-201ENST00000244360 FCN3O75636 299 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 NDUFB4O95168 129 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 CHRNA7P36544 502 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 UBE2G2P60604 165 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 GCSAMLQ5JQS6 135 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 FAM78BQ5VT40 261 aa17.91■□□□□ 0.46
RNF39-201ENST00000244360 TNFRSF13BO14836 293 aaPredicted RBP17.9■□□□□ 0.46
RNF39-201ENST00000244360 ZNF833PQ6ZTB9 187 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 C1orf159Q96HA4 380 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 TMEM204Q9BSN7 226 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 SCNM1Q9BWG6 230 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 NPVFQ9HCQ7 196 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 PRNDQ9UKY0 176 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 ATMQ13315 3056 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 A0A087X0M5 115 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 MDFIC2A0A1B0GVS7 189 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 A0A1B0GX30 115 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 NPY1RP25929 384 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 IL3RAP26951 378 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 CNN1P51911 297 aaKnown RBP17.9■□□□□ 0.46
RNF39-201ENST00000244360 RPL31P62899 125 aaKnown RBP17.9■□□□□ 0.46
RNF39-201ENST00000244360 SLC24A4Q8NFF2 622 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 TMEM37Q8WXS4 190 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 NOL4LQ96MY1 436 aaPredicted RBP17.9■□□□□ 0.46
RNF39-201ENST00000244360 WFIKKN1Q96NZ8 548 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 PATZ1Q9HBE1 687 aaKnown RBP17.9■□□□□ 0.46
RNF39-201ENST00000244360 ZNF257Q9Y2Q1 563 aa17.9■□□□□ 0.46
RNF39-201ENST00000244360 PPIAL4EA0A075B759 164 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 PPIAL4DF5H284 164 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 ARL14EPLP0DKL9 152 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 PPIAL4FP0DN26 164 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 RTL8BQ17RB0 113 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 CLEC12BQ2HXU8 276 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 OR5T1Q8NG75 326 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 SLC35D1Q9NTN3 355 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 PPIAL4AQ9Y536 164 aa17.89■□□□□ 0.45
RNF39-201ENST00000244360 VSTM5A8MXK1 200 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 SFRP2Q96HF1 295 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 OR51B2Q9Y5P1 312 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 SHISA9B4DS77 424 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 UPK2O00526 184 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 RPL15P61313 204 aaKnown RBP17.88■□□□□ 0.45
RNF39-201ENST00000244360 DMRTC2Q8IXT2 367 aaPredicted RBP17.88■□□□□ 0.45
RNF39-201ENST00000244360 RND1Q92730 232 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 RNASE6Q93091 150 aaKnown RBP17.88■□□□□ 0.45
RNF39-201ENST00000244360 ZNF714Q96N38 554 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 NGBQ9NPG2 151 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 TMEM106BQ9NUM4 274 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 ZNRD1Q9P1U0 126 aa17.88■□□□□ 0.45
RNF39-201ENST00000244360 MT-CO2P00403 227 aa17.87■□□□□ 0.45
RNF39-201ENST00000244360 IGKV1-16P04430 117 aa17.87■□□□□ 0.45
RNF39-201ENST00000244360 RBPJQ06330 500 aa17.87■□□□□ 0.45
RNF39-201ENST00000244360 ARSJQ5FYB0 599 aaPredicted RBP17.87■□□□□ 0.45
RNF39-201ENST00000244360 PRO1933Q9H354 126 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms