RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 HIF1ANQ9NWT6 349 aa10.42□□□□□ -0.74
HIF3A-201ENST00000244302 KIAA1456Q9P272 454 aa10.42□□□□□ -0.74
HIF3A-201ENST00000244302 CR1P17927 2039 aa10.42□□□□□ -0.74
HIF3A-201ENST00000244302 ANK3Q12955 4377 aaKnown RBP10.41□□□□□ -0.74
HIF3A-201ENST00000244302 OTOGQ6ZRI0 2925 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 hCG_1809904A0A1W2PP81 198 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 A0A1W2PPE2 198 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 A0A1W2PR64 198 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 A0A1W2PRV1 198 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 FAM24AA6NFZ4 105 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 IFNA17P01571 189 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 RBP4P02753 201 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 ATP6V0CP27449 155 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 AKR1C3P42330 323 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 THBS3P49746 956 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 FHITP49789 147 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 BRD3OSQ6XYD6 125 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 MOB3BQ86TA1 216 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 C8orf31Q8N9H6 132 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.41□□□□□ -0.74
HIF3A-201ENST00000244302 OR5AN1Q8NGI8 311 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 CD300LFQ8TDQ1 290 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 TMEM186Q96B77 213 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 FBXO7Q9Y3I1 522 aa10.41□□□□□ -0.74
HIF3A-201ENST00000244302 A0A087WWC5 75 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 IGHV1-3A0A0C4DH29 117 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 CENPVL3A0A0U1RRI6 287 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 IGSF23A1L1A6 192 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 RBFOX3A6NFN3 312 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 ODF3BA8MYP8 253 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 SSSCA1O60232 199 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 HBE1P02100 147 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 OPN1MWP04001 364 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 MSMBP08118 114 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 OPN1MW2P0DN77 364 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 OPN1MW3P0DN78 364 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 IGHV4-38-2P0DP08 117 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 ZNF137PP52743 207 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 RAB2AP61019 212 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 HNF4GQ14541 408 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 TMEM252Q8N6L7 170 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 BEND2Q8NDZ0 799 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 TET2Q6N021 2002 aaPredicted RBP10.4□□□□□ -0.74
HIF3A-201ENST00000244302 AP4M1O00189 453 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 HPRT1P00492 218 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 DSCR9P59020 149 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 C1orf122Q6ZSJ8 110 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 RHOVQ96L33 236 aa10.4□□□□□ -0.74
HIF3A-201ENST00000244302 QTRT1Q9BXR0 403 aaKnown RBP10.4□□□□□ -0.74
HIF3A-201ENST00000244302 POLR3KQ9Y2Y1 108 aaPredicted RBP10.4□□□□□ -0.74
HIF3A-201ENST00000244302 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 TIMM23O14925 209 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 SLC25A6P12236 298 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 SLC25A16P16260 332 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 HTR1DP28221 377 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 RPS16P62249 146 aaKnown RBP10.39□□□□□ -0.75
HIF3A-201ENST00000244302 ID3Q02535 119 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 FABP9Q0Z7S8 132 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 TPTE2P1Q5T6R2 138 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 ISOC2Q96AB3 205 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 RPEQ96AT9 228 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 YPEL4Q96NS1 127 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 C7orf69Q9H7B7 122 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 TPSG1Q9NRR2 321 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 MMP24Q9Y5R2 645 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 H3BP45 60 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 CHST1O43916 411 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 OR2C1O95371 312 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 TGFAP01135 160 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 HSPB1P04792 205 aaKnown RBP10.39□□□□□ -0.75
HIF3A-201ENST00000244302 OR13C7P0DN81 318 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 IAPPP10997 89 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 OR4A47Q6IF82 309 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 SPSB3Q6PJ21 355 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 H2BFWTQ7Z2G1 175 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 FAM24BQ8N5W8 94 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 KIR3DL3Q8N743 410 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 OR4S2Q8NH73 311 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 LSM10Q969L4 123 aaKnown RBP10.39□□□□□ -0.75
HIF3A-201ENST00000244302 TMEM140Q9NV12 185 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 DPM3Q9P2X0 92 aa10.39□□□□□ -0.75
HIF3A-201ENST00000244302 SMAD7O15105 426 aaKnown RBP10.38□□□□□ -0.75
HIF3A-201ENST00000244302 DFFBO76075 338 aa10.38□□□□□ -0.75
HIF3A-201ENST00000244302 ZNF506Q5JVG8 444 aa10.38□□□□□ -0.75
HIF3A-201ENST00000244302 FAM120AOSQ5T036 256 aa10.38□□□□□ -0.75
HIF3A-201ENST00000244302 LRRC75A-AS1Q8N1F1 130 aa10.38□□□□□ -0.75
HIF3A-201ENST00000244302 OR10G4Q8NGN3 311 aa10.38□□□□□ -0.75
HIF3A-201ENST00000244302 NANPQ8TBE9 248 aa10.38□□□□□ -0.75
HIF3A-201ENST00000244302 MBD6Q96DN6 1003 aa10.38□□□□□ -0.75
HIF3A-201ENST00000244302 C20orf24Q9BUV8 137 aa10.38□□□□□ -0.75
HIF3A-201ENST00000244302 SETXQ7Z333 2677 aaKnown RBP10.38□□□□□ -0.75
HIF3A-201ENST00000244302 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 A0A1B0GU03 582 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 CXorf65A6NEN9 183 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 B4DSR2 109 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 E7EUB6 86 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 WRBO00258 174 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 RBMXL2O75526 392 aaKnown RBP10.37□□□□□ -0.75
HIF3A-201ENST00000244302 IGLV2-23P01705 113 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms