RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 MBD3L4A6NDZ8 208 aaPredicted RBP13.8□□□□□ -0.2
SSPN-201ENST00000242729 MBD3L3A6NE82 208 aaPredicted RBP13.8□□□□□ -0.2
SSPN-201ENST00000242729 MBD3L5A6NJ08 208 aaPredicted RBP13.8□□□□□ -0.2
SSPN-201ENST00000242729 DIAPH2-AS1Q14236 149 aa13.8□□□□□ -0.2
SSPN-201ENST00000242729 TRAT1Q6PIZ9 186 aa13.8□□□□□ -0.2
SSPN-201ENST00000242729 TEPPQ6URK8 271 aa13.8□□□□□ -0.2
SSPN-201ENST00000242729 MRPL41Q8IXM3 137 aaKnown RBP13.8□□□□□ -0.2
SSPN-201ENST00000242729 MBD3L2Q8NHZ7 208 aaPredicted RBP13.8□□□□□ -0.2
SSPN-201ENST00000242729 SFRP2Q96HF1 295 aa13.8□□□□□ -0.2
SSPN-201ENST00000242729 PYGO2Q9BRQ0 406 aa13.8□□□□□ -0.2
SSPN-201ENST00000242729 NPVFQ9HCQ7 196 aa13.8□□□□□ -0.2
SSPN-201ENST00000242729 J3QR06 171 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 LHBP01229 141 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 TIMP3P35625 211 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 RPP30P78346 268 aaKnown RBP13.79□□□□□ -0.2
SSPN-201ENST00000242729 PRR31Q5SQ13 230 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 TIMM23BQ5SRD1 257 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 C14orf144Q96I85 54 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 GAFA1Q96PS6 74 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 COL12A1Q99715 3063 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 TANC2Q9HCD6 1990 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 DVL1O14640 695 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 KLK10O43240 276 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 PDE6DO43924 150 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 STAG3L2P0CL84 134 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 STAG3L3P0CL85 134 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 CBLN1P23435 193 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 GCHFRP30047 84 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 ANAPC16Q96DE5 110 aa13.79□□□□□ -0.2
SSPN-201ENST00000242729 IGKV1OR2-108A0A075B7D4 117 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 A0A087X0M5 115 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 MDFIC2A0A1B0GVS7 189 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 A0A1B0GX30 115 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 K7EN84 100 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 MZT1Q08AG7 82 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 PSG5Q15238 335 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 ACTL10Q5JWF8 245 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 KCNIP4Q6PIL6 250 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 NHLRC2Q8NBF2 726 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 OR9G1Q8NH87 305 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 H1FXQ92522 213 aaKnown RBP13.78□□□□□ -0.2
SSPN-201ENST00000242729 CXorf1O96002 111 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 HSPE1P61604 102 aaKnown RBP13.78□□□□□ -0.2
SSPN-201ENST00000242729 C10orf55Q5SWW7 151 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 KCNIP2Q9NS61 270 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 DSCAML1Q8TD84 2053 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 ZNF318Q5VUA4 2279 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 ATRXP46100 2492 aa13.78□□□□□ -0.2
SSPN-201ENST00000242729 E7EUB6 86 aa13.77□□□□□ -0.2
SSPN-201ENST00000242729 CT45A6P0DMU7 189 aa13.77□□□□□ -0.2
SSPN-201ENST00000242729 CT45A5P0DMU8 189 aa13.77□□□□□ -0.2
SSPN-201ENST00000242729 CT45A7P0DMV0 189 aa13.77□□□□□ -0.2
SSPN-201ENST00000242729 CHRNB4P30926 498 aa13.77□□□□□ -0.2
SSPN-201ENST00000242729 FXYD3Q14802 87 aa13.77□□□□□ -0.2
SSPN-201ENST00000242729 DIRC2Q96SL1 478 aa13.77□□□□□ -0.2
SSPN-201ENST00000242729 OR7C2O60412 319 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 GGCTO75223 188 aaKnown RBP13.77□□□□□ -0.21
SSPN-201ENST00000242729 OR4A8P0C604 315 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 CGB3P0DN86 165 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 CGB7P0DN87 165 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 DDTP30046 118 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 TCL1AP56279 114 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 CCL17Q92583 94 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 ACY3Q96HD9 319 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 A0A1B0GV90 55 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 PRB4P10163 310 aaPredicted RBP13.77□□□□□ -0.21
SSPN-201ENST00000242729 DOLPP1Q86YN1 238 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.21
SSPN-201ENST00000242729 LSM4Q9Y4Z0 139 aaKnown RBP13.77□□□□□ -0.21
SSPN-201ENST00000242729 CUL9Q8IWT3 2517 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 TRAV5A0A0B4J249 113 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 CD40P25942 277 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 CRYBB3P26998 211 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 LGALS4P56470 323 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 SELENOVP59797 346 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 SSBP2P81877 361 aaPredicted RBP13.76□□□□□ -0.21
SSPN-201ENST00000242729 STUMQ69YW2 141 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 ZNF664Q8N3J9 261 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 OR2T6Q8NHC8 308 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 PLEKHA3Q9HB20 300 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 TMEM14BQ9NUH8 114 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 MED13LQ71F56 2210 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 VENTXO95231 258 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 OR10J1P30954 320 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 ADMP35318 185 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 CNN1P51911 297 aaKnown RBP13.76□□□□□ -0.21
SSPN-201ENST00000242729 C1orf185Q5T7R7 199 aa13.76□□□□□ -0.21
SSPN-201ENST00000242729 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
SSPN-201ENST00000242729 IGHV3-72A0A0B4J1Y9 119 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 REG1AP05451 166 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 SAA1P0DJI8 122 aaPredicted RBP13.75□□□□□ -0.21
SSPN-201ENST00000242729 CCKARP32238 428 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 ZNF90Q03938 601 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 MORN5Q5VZ52 161 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 IGF2RP11717 2491 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 TSTD3H0UI37 97 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 SCGB1D1O95968 90 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 PLAUP00749 431 aa13.75□□□□□ -0.21
SSPN-201ENST00000242729 SRP14P37108 136 aaKnown RBP13.75□□□□□ -0.21
SSPN-201ENST00000242729 RAB7AP51149 207 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms