RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 FAM90A26D6RGX4 464 aa8.91□□□□□ -0.98
TNFAIP3-201ENST00000237289 EIF5AP63241 154 aaKnown RBP8.91□□□□□ -0.98
TNFAIP3-201ENST00000237289 RAB32Q13637 225 aa8.91□□□□□ -0.98
TNFAIP3-201ENST00000237289 Q56UQ5 140 aa8.91□□□□□ -0.98
TNFAIP3-201ENST00000237289 ZNF562Q6V9R5 426 aa8.91□□□□□ -0.98
TNFAIP3-201ENST00000237289 ASB13Q8WXK3 278 aa8.91□□□□□ -0.98
TNFAIP3-201ENST00000237289 TANC2Q9HCD6 1990 aa8.91□□□□□ -0.98
TNFAIP3-201ENST00000237289 TRAV41A0A0B4J266 112 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 ANKRD34BA5PLL1 514 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 REG1AP05451 166 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 OR9G9P0C7N8 305 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 NPY1RP25929 384 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 TNFRSF9Q07011 255 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 ETV3LQ6ZN32 361 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 FAM90A9PA6NNJ1 464 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 YIF1AO95070 293 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 SCAF4O95104 1147 aaKnown RBP8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 ACSM6Q6P461 480 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 TMEM68Q96MH6 324 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 U3KQ87 197 aa8.9□□□□□ -0.98
TNFAIP3-201ENST00000237289 PSMB11A5LHX3 300 aa8.9□□□□□ -0.99
TNFAIP3-201ENST00000237289 ARPC5O15511 151 aa8.9□□□□□ -0.99
TNFAIP3-201ENST00000237289 DEFA5Q01523 94 aa8.9□□□□□ -0.99
TNFAIP3-201ENST00000237289 TRGV3P03979 118 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 FABP1P07148 127 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 TPPP2P59282 170 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 PJVKQ0ZLH3 352 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 SLC24A4Q8NFF2 622 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 NMES1Q9C002 83 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 RBKSQ9H477 322 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 A6NDX4 124 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 PROP1O75360 226 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 C10orf55Q5SWW7 151 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 LHFPL5Q8TAF8 219 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 ACY3Q96HD9 319 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 OR10C1Q96KK4 312 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 SMIM3Q9BZL3 60 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 RANGRFQ9HD47 186 aaPredicted RBP8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 TRAV3A0A0B4J244 114 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 SRRM4A7MD48 611 aaKnown RBP8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 CORTO00230 105 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 IGKV1-5P01602 117 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 SLC25A6P12236 298 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 HIST1H1BP16401 226 aaKnown RBP8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 OR1S2Q8NGQ3 325 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 DDB2Q92466 427 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 C5orf30Q96GV9 206 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 MFFQ9GZY8 342 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 MBD2Q9UBB5 411 aa8.89□□□□□ -0.99
TNFAIP3-201ENST00000237289 TEX50A0A1B0GTY4 177 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 NPBWR1P48145 328 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 BLCAPP62952 87 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 TENM4Q6N022 2769 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 A0A0G2JLM5 398 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 ZFP92A6NM28 416 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 IGLV2-14P01704 120 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 HLA-DRB1P01911 266 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 PDLIM3Q53GG5 364 aaPredicted RBP8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 C11orf44Q8N8P7 122 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 CFHR4Q92496 578 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 MLXQ9UH92 298 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 FOXA2Q9Y261 457 aaPredicted RBP8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 ZNF257Q9Y2Q1 563 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 UTP20O75691 2785 aaKnown RBP8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 FCN1O00602 326 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 HILS1P60008 231 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 ATP5G2Q06055 141 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 NPBQ8NG41 125 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 PFDN2Q9UHV9 154 aa8.88□□□□□ -0.99
TNFAIP3-201ENST00000237289 UBA52P62987 128 aaKnown RBP8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 RELBQ01201 579 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 CLINT1Q14677 625 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 ZNF329Q86UD4 541 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 RBMXL1Q96E39 390 aaKnown RBP8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 ATP6V0E1O15342 81 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 GNG7O60262 68 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 CST7O76096 145 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 METTL15P1P0C7V9 234 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 TEX38Q6PEX7 206 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 C12orf54Q6X4T0 127 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 C3orf56Q8N813 242 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 WDR89Q96FK6 387 aaPredicted RBP8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 RITA1Q96K30 269 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 HYLS1Q96M11 299 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 NEURL2Q9BR09 285 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 WNT10AQ9GZT5 417 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 ARL6Q9H0F7 186 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 GAR1Q9NY12 217 aaKnown RBP8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 IGHV3-21A0A0B4J1V1 117 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 OR2J3O76001 311 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 MPC2O95563 127 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 RPL12P30050 165 aaKnown RBP8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 PRCDQ00LT1 54 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 BAXQ07812 192 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 OR2C3Q8N628 320 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 Q8N9W7 124 aa8.87□□□□□ -0.99
TNFAIP3-201ENST00000237289 ZNF471Q9BX82 626 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms