RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ZNF799Q96GE5 643 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FBLL1A6NHQ2 334 aaKnown RBP10.79□□□□□ -0.68
MSH2-201ENST00000233146 CYBAP13498 195 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 MFAP2P55001 183 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 TIGITQ495A1 244 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 TMEM42Q69YG0 159 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 A0A1W2PRE2 83 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A10PA6NDY2 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A18PA6NE21 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A16PA6NEW6 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A20PA6NIJ5 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A8PA6NJQ4 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A7PA6NKC0 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A22PA8MWA6 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A12PA8MX19 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A5PA8MXJ8 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A23PA8MXZ1 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 IGHV3-7P01780 117 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 P04436 131 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 CLEC3BP05452 202 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A15PP0C7V4 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A13PP0C7W8 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A14PP0C7W9 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FAM90A24PP0C7X0 464 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 FCGR2BP31994 310 aaPredicted RBP10.79□□□□□ -0.68
MSH2-201ENST00000233146 OPRK1P41145 380 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 LYSMD4Q5XG99 296 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 HLA-DQA1Q5Y7H0 255 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 DPF1Q92782 380 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 SIGLEC8Q9NYZ4 499 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 IL36RNQ9UBH0 155 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 KCNS2Q9ULS6 477 aa10.79□□□□□ -0.68
MSH2-201ENST00000233146 WIPI1Q5MNZ9 446 aaPredicted RBP10.78□□□□□ -0.68
MSH2-201ENST00000233146 TEPPQ6URK8 271 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 PARM1Q6UWI2 310 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 FAM168AQ92567 244 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 WDR87Q6ZQQ6 2873 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 ZG16O60844 167 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 KLF7O75840 302 aaPredicted RBP10.78□□□□□ -0.68
MSH2-201ENST00000233146 CTGFP29279 349 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 BOD1L2Q8IYS8 172 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 TTC9CQ8N5M4 171 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 TET1Q8NFU7 2136 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 ABHD17AQ96GS6 310 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 GRAMD2BQ96HH9 432 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
MSH2-201ENST00000233146 KBTBD11-OT1A0A1B0GTJ5 212 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 FBXW4P57775 412 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 CR1LQ2VPA4 569 aa10.78□□□□□ -0.68
MSH2-201ENST00000233146 IGKV3-11P04433 115 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 OOSP2Q86WS3 158 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 MRPL43Q8N983 215 aaKnown RBP10.77□□□□□ -0.69
MSH2-201ENST00000233146 ST8SIA1Q92185 356 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 PRR33A8MZF0 331 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 H0Y8G0 127 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 SIVA1O15304 175 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 P0C879 139 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 SPATA46Q5T0L3 261 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 SFTPA1Q8IWL2 248 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 OR9G4Q8NGQ1 327 aa10.77□□□□□ -0.69
MSH2-201ENST00000233146 MPDU1O75352 247 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 SPINK8P0C7L1 97 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 FAM87AP0C7U9 286 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 ARL4DP49703 201 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 PRSS12P56730 875 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 CCL7P80098 99 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 GUSBP1Q15486 140 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 SH2D6Q7Z4S9 175 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 NUP35Q8NFH5 326 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 OR4X2Q8NGF9 303 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 CCL4L1Q8NHW4 92 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 ZDHHC16Q969W1 377 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 GGTLC1Q9BX51 225 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 CYSLTR1Q9Y271 337 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 LINC00312Q9Y6C7 94 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 PRSS38A1L453 326 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 A1L4Q6 167 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 SMIM13P0DJ93 91 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 GTSF1Q8WW33 167 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 C18orf15Q96N68 181 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 RNF208Q9H0X6 261 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 HSPB8Q9UJY1 196 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 H3BML4 177 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 ETDBQ3ZM63 59 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 TRIB1Q96RU8 372 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 C1QTNF5Q9BXJ0 243 aa10.76□□□□□ -0.69
MSH2-201ENST00000233146 A0A1B0GW15 77 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 PPP1CAP62136 330 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 RPL32P62910 135 aaKnown RBP10.75□□□□□ -0.69
MSH2-201ENST00000233146 ZXDAP98168 799 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 RHBDD2Q6NTF9 364 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 C20orf204Q6ZNR8 217 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 NHLRC2Q8NBF2 726 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 OR52E5Q8NH55 327 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 SSBP3Q9BWW4 388 aaPredicted RBP10.75□□□□□ -0.69
MSH2-201ENST00000233146 CDIP1Q9H305 208 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.75□□□□□ -0.69
MSH2-201ENST00000233146 A0A1W2PRD5 423 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 A0A1W2PRF3 423 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 A0A1W2PRM7 423 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms