RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 CXorf67Q86X51 503 aaPredicted RBP11.54□□□□□ -0.56
SCNN1A-201ENST00000228916 DOLPP1Q86YN1 238 aa11.54□□□□□ -0.56
SCNN1A-201ENST00000228916 RNASE7Q9H1E1 156 aaKnown RBP11.54□□□□□ -0.56
SCNN1A-201ENST00000228916 C20orf202A1L168 122 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 SPINT2O43291 252 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 HLA-DQA1P01909 254 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 AMY1AP04745 511 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 SRIP30626 198 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 ERVK-16P61578 105 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 GCNT2Q8N0V5 402 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 KLHDC1Q8N7A1 406 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 IL19Q9UHD0 177 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 ISLRO14498 428 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 CRYBB3P26998 211 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 MIR17HGQ75NE6 70 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 CCL25O15444 150 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 RAB31Q13636 194 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 TRAT1Q6PIZ9 186 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 TSKUQ8WUA8 353 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 DCTN5Q9BTE1 182 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 OBP2BQ9NPH6 170 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 TMEM167BQ9NRX6 74 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
SCNN1A-201ENST00000228916 MED13Q9UHV7 2174 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 CA2P00918 260 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 LINC00869P0C866 280 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 MPV17P39210 176 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 ABHD17BQ5VST6 288 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 WDR82Q6UXN9 313 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 LINC00696Q6ZRV3 163 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 FAM90A1Q86YD7 464 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 CDC42EP3Q9UKI2 254 aa11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 MRPS16Q9Y3D3 137 aaKnown RBP11.52□□□□□ -0.56
SCNN1A-201ENST00000228916 M0R1X1 148 aa11.52□□□□□ -0.57
SCNN1A-201ENST00000228916 IGLV2-8P01709 118 aa11.52□□□□□ -0.57
SCNN1A-201ENST00000228916 SLC35B1P78383 322 aa11.52□□□□□ -0.57
SCNN1A-201ENST00000228916 FXYD3Q14802 87 aa11.52□□□□□ -0.57
SCNN1A-201ENST00000228916 TIGITQ495A1 244 aa11.52□□□□□ -0.57
SCNN1A-201ENST00000228916 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
SCNN1A-201ENST00000228916 TOMM40O96008 361 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 NPY1RP25929 384 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 TSPOP30536 169 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 PSG5Q15238 335 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 MORN2Q502X0 79 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 KLF14Q8TD94 323 aaPredicted RBP11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 WNT10AQ9GZT5 417 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 MRPL27Q9P0M9 148 aaKnown RBP11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 CER1O95813 267 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 IGFBP2P18065 325 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 TCL1AP56279 114 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 KLF3P57682 345 aaPredicted RBP11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 RBX1P62877 108 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 LTC4SQ16873 150 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 ZNF439Q8NDP4 499 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 NEUROG1Q92886 237 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 CFAP47Q6ZTR5 3102 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 NKX6-3A6NJ46 265 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 C15orf61A6NNL5 157 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 AHRRA9YTQ3 701 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 FNDC10F2Z333 226 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 PTTG1IPP53801 180 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 PEAR1Q5VY43 1037 aaPredicted RBP11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 FAM19A2Q8N3H0 131 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 RNASE8Q8TDE3 154 aaKnown RBP11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 FAM234AQ9H0X4 552 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 CXXC4Q9H2H0 198 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 JPT1Q9UK76 154 aa11.51□□□□□ -0.57
SCNN1A-201ENST00000228916 RPL39P5Q59GN2 51 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 LEMD1Q68G75 181 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 MRPL54Q6P161 138 aaKnown RBP11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 TRIOBPQ9H2D6 2365 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 ACTL6BO94805 426 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 GNG10P50151 68 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 SELENOVP59797 346 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 PMCHL1Q16048 86 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 SMIM21Q3B7S5 101 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 FAM214BQ7L5A3 538 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 DDB2Q92466 427 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 CORO2AQ92828 525 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 IGF2BP2-AS1Q96M15 143 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 S1PR3Q99500 378 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 CLEC7AQ9BXN2 247 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 GNG12Q9UBI6 72 aa11.5□□□□□ -0.57
SCNN1A-201ENST00000228916 IGHV2-26A0A0B4J1V2 119 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 GGTLC3B5MD39 225 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 APCSP02743 223 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 IBA57Q5T440 356 aaKnown RBP11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 CD177Q8N6Q3 437 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 OR5B3Q8NH48 314 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 BORCS7Q96B45 105 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 PLPPR2Q96GM1 343 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 SPRY4Q9C004 299 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 COX11Q9Y6N1 276 aa11.49□□□□□ -0.57
SCNN1A-201ENST00000228916 URB1O60287 2271 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms