RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 MSMPQ1L6U9 139 aa20.45■□□□□ 0.86
RUNDC3A-201ENST00000225441 SSX9Q7RTT3 188 aa20.45■□□□□ 0.86
RUNDC3A-201ENST00000225441 LRP11Q86VZ4 500 aa20.45■□□□□ 0.86
RUNDC3A-201ENST00000225441 ENY2Q9NPA8 101 aa20.45■□□□□ 0.86
RUNDC3A-201ENST00000225441 RNF7Q9UBF6 113 aa20.45■□□□□ 0.86
RUNDC3A-201ENST00000225441 TRGV10A0A0A0MS01 117 aa20.44■□□□□ 0.86
RUNDC3A-201ENST00000225441 TRAV38-1A0A0B4J264 116 aa20.44■□□□□ 0.86
RUNDC3A-201ENST00000225441 PRB1P04280 392 aa20.44■□□□□ 0.86
RUNDC3A-201ENST00000225441 RPL29P47914 159 aaKnown RBP20.44■□□□□ 0.86
RUNDC3A-201ENST00000225441 RHOBP62745 196 aa20.44■□□□□ 0.86
RUNDC3A-201ENST00000225441 CST9LP1Q5W188 147 aa20.44■□□□□ 0.86
RUNDC3A-201ENST00000225441 NECAP1Q8NC96 275 aa20.44■□□□□ 0.86
RUNDC3A-201ENST00000225441 TRAV9-1A0A075B6T8 112 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 A0A1W2PPQ1 181 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 SSX2Q16385 188 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 TEPPQ6URK8 271 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 ZNRF1Q8ND25 227 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 IL19Q9UHD0 177 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 PRNDQ9UKY0 176 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 ZNF257Q9Y2Q1 563 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 LY96Q9Y6Y9 160 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 XKRY2A2RUG3 117 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 NPY1RP25929 384 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 GRNP28799 593 aaKnown RBP20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 PDZD11Q5EBL8 140 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 CT45A1Q5HYN5 189 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 TMEM144Q7Z5S9 345 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 SLC24A4Q8NFF2 622 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 CT45A3Q8NHU0 189 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 NGBQ9NPG2 151 aa20.43■□□□□ 0.86
RUNDC3A-201ENST00000225441 CACNA1DQ01668 2161 aa20.42■□□□□ 0.86
RUNDC3A-201ENST00000225441 CFAP46Q8IYW2 2715 aa20.42■□□□□ 0.86
RUNDC3A-201ENST00000225441 IGHV3OR15-7A0A075B7D8 119 aa20.42■□□□□ 0.86
RUNDC3A-201ENST00000225441 DPRXA6NFQ7 191 aa20.42■□□□□ 0.86
RUNDC3A-201ENST00000225441 GCGP01275 180 aa20.42■□□□□ 0.86
RUNDC3A-201ENST00000225441 ITLN1Q8WWA0 313 aa20.42■□□□□ 0.86
RUNDC3A-201ENST00000225441 RHOVQ96L33 236 aa20.42■□□□□ 0.86
RUNDC3A-201ENST00000225441 ELOVL1Q9BW60 279 aa20.42■□□□□ 0.86
RUNDC3A-201ENST00000225441 NDUFB4O95168 129 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 ARL14EPLP0DKL9 152 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 MRPS11P82912 194 aaKnown RBP20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 DEFA6Q01524 100 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 STUMQ69YW2 141 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 ZNF439Q8NDP4 499 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 TSTD3H0UI37 97 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 IL6RP08887 468 aaPredicted RBP20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 TNFSF4P23510 183 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 ATP5G3P48201 142 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 GCSAMLQ5JQS6 135 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 OR4A47Q6IF82 309 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 ABHD12Q8N2K0 398 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 IDI2-AS1Q9NZ38 188 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 EPG5Q9HCE0 2579 aa20.41■□□□□ 0.86
RUNDC3A-201ENST00000225441 AMBPP02760 352 aa20.4■□□□□ 0.86
RUNDC3A-201ENST00000225441 AREGP15514 252 aa20.4■□□□□ 0.86
RUNDC3A-201ENST00000225441 BSPH1Q075Z2 132 aa20.4■□□□□ 0.86
RUNDC3A-201ENST00000225441 MIC13Q5XKP0 118 aa20.4■□□□□ 0.86
RUNDC3A-201ENST00000225441 C11orf52Q96A22 123 aa20.4■□□□□ 0.86
RUNDC3A-201ENST00000225441 PATZ1Q9HBE1 687 aaKnown RBP20.4■□□□□ 0.86
RUNDC3A-201ENST00000225441 SLC25A10Q9UBX3 287 aaPredicted RBP20.4■□□□□ 0.86
RUNDC3A-201ENST00000225441 SAA2-SAA4A0A096LPE2 208 aa20.39■□□□□ 0.86
RUNDC3A-201ENST00000225441 TRAV3A0A0B4J244 114 aa20.39■□□□□ 0.86
RUNDC3A-201ENST00000225441 MDFIC2A0A1B0GVS7 189 aa20.39■□□□□ 0.86
RUNDC3A-201ENST00000225441 SAA2P0DJI9 122 aaPredicted RBP20.39■□□□□ 0.86
RUNDC3A-201ENST00000225441 ZNF843Q8N446 348 aa20.39■□□□□ 0.86
RUNDC3A-201ENST00000225441 SFRP2Q96HF1 295 aa20.39■□□□□ 0.86
RUNDC3A-201ENST00000225441 FKBP11Q9NYL4 201 aa20.39■□□□□ 0.86
RUNDC3A-201ENST00000225441 DOCK11Q5JSL3 2073 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 SLC31A2O15432 143 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 SPRY3O43610 288 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 GCHFRP30047 84 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 VKORC1L1Q8N0U8 176 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 NUP37Q8NFH4 326 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 LINC01560Q8TB33 94 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 ITLN2Q8WWU7 325 aaPredicted RBP20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 NEUROG1Q92886 237 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 C19orf24Q9BVV8 132 aa20.39■□□□□ 0.85
RUNDC3A-201ENST00000225441 HCFC1P51610 2035 aa20.38■□□□□ 0.85
RUNDC3A-201ENST00000225441 UBE2G2P60604 165 aa20.38■□□□□ 0.85
RUNDC3A-201ENST00000225441 RPL15P61313 204 aaKnown RBP20.38■□□□□ 0.85
RUNDC3A-201ENST00000225441 TMEM18Q96B42 140 aa20.38■□□□□ 0.85
RUNDC3A-201ENST00000225441 UHRF2Q96PU4 802 aa20.38■□□□□ 0.85
RUNDC3A-201ENST00000225441 C9JCJ5 164 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 IL3RAP26951 378 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 CHRNA7P36544 502 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 ARSJQ5FYB0 599 aaPredicted RBP20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 FAM78BQ5VT40 261 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 VHLLQ6RSH7 139 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 C1orf159Q96HA4 380 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 HEATR1Q9H583 2144 aaKnown RBP20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 DIDO1Q9BTC0 2240 aaKnown RBP20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 PAX1P15863 534 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 PRR20EP86478 221 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 PRR20CP86479 221 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 PRR20DP86480 221 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 PRR20BP86481 221 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 PRR20AP86496 221 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 TNFAIP6P98066 277 aaPredicted RBP20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 GAMTQ14353 236 aa20.37■□□□□ 0.85
RUNDC3A-201ENST00000225441 EFNB3Q15768 340 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms