RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 KIAA1671Q9BY89 1806 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 M0QZK8 103 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 LDLRAD4O15165 306 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 GGCTO75223 188 aaKnown RBP9.7□□□□□ -0.86
NOD1-201ENST00000222823 BSPH1Q075Z2 132 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 FAM106AQ4KMX7 169 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 SRSF12Q8WXF0 261 aaKnown RBP9.7□□□□□ -0.86
NOD1-201ENST00000222823 COL4A3Q01955 1670 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 TGIF2-C20orf24A0A0A6YYL0 155 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 RNF222A6NCQ9 220 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 NTN3O00634 580 aaPredicted RBP9.7□□□□□ -0.86
NOD1-201ENST00000222823 IL4P05112 153 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 PAQR4Q8N4S7 273 aaPredicted RBP9.7□□□□□ -0.86
NOD1-201ENST00000222823 MRPL32Q9BYC8 188 aaKnown RBP9.7□□□□□ -0.86
NOD1-201ENST00000222823 GPR61Q9BZJ8 451 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 DCAF16Q9NXF7 216 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 MOSP00540 346 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 PDLIM4P50479 330 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 CDK2AP1O14519 115 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 PSMB2P49721 201 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 RAB9AP51151 201 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 KIAA1644Q3SXP7 199 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 RNFT1Q5M7Z0 435 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 OR4B1Q8NGF8 309 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 OR10S1Q8NGN2 331 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 MRPL18Q9H0U6 180 aaKnown RBP9.69□□□□□ -0.86
NOD1-201ENST00000222823 ALPK3Q96L96 1907 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 ZNF407Q9C0G0 2248 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 C17orf100A8MU93 164 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 EFNA2O43921 213 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
NOD1-201ENST00000222823 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.69□□□□□ -0.86
NOD1-201ENST00000222823 OR1P1Q8NH06 330 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 PGLYRP4Q96LB8 373 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 NPCDR1Q9BY65 106 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 FBXL15Q9H469 300 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 SEMA5BQ9P283 1151 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 CCL1P22362 96 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 NPPCP23582 126 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 ZNF506Q5JVG8 444 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 GOLT1AQ6ZVE7 132 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 KIAA1549LQ6ZVL6 1849 aa9.69□□□□□ -0.86
NOD1-201ENST00000222823 TRBV6-7A0A0A0MS04 114 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 GCGP01275 180 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 IL6RP08887 468 aaPredicted RBP9.68□□□□□ -0.86
NOD1-201ENST00000222823 CSRP1P21291 193 aaKnown RBP9.68□□□□□ -0.86
NOD1-201ENST00000222823 OR4A47Q6IF82 309 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 FAM89BQ8N5H3 189 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 IFI27L2Q9H2X8 130 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 ZFP30Q9Y2G7 519 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 LEPROTL1O95214 131 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
NOD1-201ENST00000222823 MEF2CQ06413 473 aaPredicted RBP9.68□□□□□ -0.86
NOD1-201ENST00000222823 PLPPR1Q8TBJ4 325 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 LYZL4Q96KX0 146 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 GGACTQ9BVM4 153 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 LBHQ53QV2 105 aaPredicted RBP9.68□□□□□ -0.86
NOD1-201ENST00000222823 C2orf83Q53S99 150 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 DDB2Q92466 427 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 HIST1H2BAQ96A08 127 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 IGHV3OR16-13A0A075B7E8 117 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 IGHV3OR16-10A0A075B7F0 116 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 A6NDN8 102 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 C5orf52A6NGY3 159 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 NBEAP1P0C6P0 100 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 PSG9Q00887 426 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 ATP5G2Q06055 141 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 LINC00305Q7Z4B0 112 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 FAM90A1Q86YD7 464 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 AUP1Q9Y679 476 aa9.68□□□□□ -0.86
NOD1-201ENST00000222823 IGKV1D-13A0A0B4J2D9 117 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 IGKV1-13P0DP09 117 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 SRIP30626 198 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 NMUP48645 174 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 CYP2G1PQ6ZSU1 146 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 TEX29Q8N6K0 151 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 NOTCH2Q04721 2471 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 ZIC4Q8N9L1 334 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 ZNF502Q8TBZ5 544 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 SSBP3Q9BWW4 388 aaPredicted RBP9.67□□□□□ -0.86
NOD1-201ENST00000222823 PHLDA3Q9Y5J5 127 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 PINLYPA6NC86 204 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 RPS20P60866 119 aaKnown RBP9.67□□□□□ -0.86
NOD1-201ENST00000222823 CENPWQ5EE01 88 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 GTF3AQ92664 365 aaKnown RBP9.67□□□□□ -0.86
NOD1-201ENST00000222823 SFRP2Q96HF1 295 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 LINC00312Q9Y6C7 94 aa9.67□□□□□ -0.86
NOD1-201ENST00000222823 M0R3E3 92 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 VENTXO95231 258 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 TRGC1P0CF51 173 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 NAT1P18440 290 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 ANOS1P23352 680 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 CX3CL1P78423 397 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 NEU4Q8WWR8 484 aaPredicted RBP9.66□□□□□ -0.86
NOD1-201ENST00000222823 LOC105371267A0A1B0GV96 52 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 CD59P13987 128 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 GPX4P36969 197 aaPredicted RBP9.66□□□□□ -0.86
NOD1-201ENST00000222823 NEU1Q99519 415 aa9.66□□□□□ -0.86
NOD1-201ENST00000222823 FAM208BQ5VWN6 2430 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms