RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.73□□□□□ -0.53
SIPA1L3-201ENST00000222345 A0A1B0GTI1 187 aa11.73□□□□□ -0.53
SIPA1L3-201ENST00000222345 NPIPB13A6NJU9 1138 aa11.73□□□□□ -0.53
SIPA1L3-201ENST00000222345 NPIPB4C9JG80 1138 aa11.73□□□□□ -0.53
SIPA1L3-201ENST00000222345 FOXL1Q12952 345 aa11.73□□□□□ -0.53
SIPA1L3-201ENST00000222345 DDB2Q92466 427 aa11.73□□□□□ -0.53
SIPA1L3-201ENST00000222345 FOXD3Q9UJU5 478 aaPredicted RBP11.73□□□□□ -0.53
SIPA1L3-201ENST00000222345 ADAMTSL3P82987 1691 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 GGTLC3B5MD39 225 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 CTGFP29279 349 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 FAM219BQ5XKK7 198 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 FAM159AQ6UWV7 190 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 TCF19Q9Y242 345 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 HS3ST3B1Q9Y662 390 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 TMEM14DPA8MWL7 114 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 LHX8Q68G74 356 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 RSPO2Q6UXX9 243 aaPredicted RBP11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 JPT1Q9UK76 154 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 IGHV5-51A0A0C4DH38 117 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 RND2P52198 227 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 TAF1LQ8IZX4 1826 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 ORMDL2Q53FV1 153 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 OR52E5Q8NH55 327 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 R3HDMLQ9H3Y0 253 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 ECSCRQ19T08 205 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 RASL10BQ96S79 203 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 GDF15Q99988 308 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 ERG28Q9UKR5 140 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 NKX2-8O15522 239 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 TMEM155Q4W5P6 130 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 ACTL10Q5JWF8 245 aa11.72□□□□□ -0.53
SIPA1L3-201ENST00000222345 ATXN7O15265 892 aaPredicted RBP11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 TBX6O95947 436 aaPredicted RBP11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 FAM106CPP0CH98 169 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 APELAP0DMC3 54 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 LOXL3P58215 753 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 WDR82Q6UXN9 313 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 PHLDA1Q8WV24 401 aaPredicted RBP11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 TNFRSF6BO95407 300 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 MPV17P39210 176 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 ZNF71Q9NQZ8 489 aaPredicted RBP11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 INTS1Q8N201 2190 aaKnown RBP11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 IL6RP08887 468 aaPredicted RBP11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 NBEAP1P0C6P0 100 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 TM2D1Q9BX74 207 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 R4GN57 208 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 RHOGP84095 191 aa11.71□□□□□ -0.53
SIPA1L3-201ENST00000222345 NDUFS6O75380 124 aaKnown RBP11.71□□□□□ -0.54
SIPA1L3-201ENST00000222345 PLAUP00749 431 aa11.71□□□□□ -0.54
SIPA1L3-201ENST00000222345 KIR3DL3Q8N743 410 aa11.71□□□□□ -0.54
SIPA1L3-201ENST00000222345 ZPLD1Q8TCW7 415 aa11.71□□□□□ -0.54
SIPA1L3-201ENST00000222345 ITGB1BP1O14713 200 aa11.71□□□□□ -0.54
SIPA1L3-201ENST00000222345 ZNF703Q9H7S9 590 aaPredicted RBP11.71□□□□□ -0.54
SIPA1L3-201ENST00000222345 IGKV3-7A0A075B6H7 116 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 TRAV21A0A0B4J279 112 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 CACNG8Q8WXS5 425 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 SBF2Q86WG5 1849 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 TDGF1P3P51864 188 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 MS4A5Q9H3V2 200 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 TMEM238C9JI98 176 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 UCP1P25874 307 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 KLF12Q9Y4X4 402 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 CD5LO43866 347 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 CGAP01215 116 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 FBXW9Q5XUX1 488 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 FER1L6-AS1Q8NA97 138 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 OR9G9P0C7N8 305 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 LIFP15018 202 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 FSCN3Q9NQT6 498 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 CD3EP07766 207 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 NXPH1P58417 271 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 PRR7Q8TB68 274 aa11.7□□□□□ -0.54
SIPA1L3-201ENST00000222345 CST9LQ9H4G1 147 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 IGHV3-21A0A0B4J1V1 117 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 MSGN1A6NI15 193 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 A8MWP6 167 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 PIN1P1O15428 100 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 RNASEH2CQ8TDP1 164 aaKnown RBP11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 TNFRSF18Q9Y5U5 241 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 M0R2P5 195 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 TGFAP01135 160 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 GPR6P46095 362 aaPredicted RBP11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 KCNK17Q96T54 332 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 PAX1P15863 534 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 SNRPD3P62318 126 aaKnown RBP11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 ATP6V0BQ99437 205 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 NPFFR1Q9GZQ6 430 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 TRAV1-1A0A0B4J248 108 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 NTN1O95631 604 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 LIMS2Q7Z4I7 341 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 PRDM14Q9GZV8 571 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 DLL3Q9NYJ7 618 aa11.69□□□□□ -0.54
SIPA1L3-201ENST00000222345 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
SIPA1L3-201ENST00000222345 MPZP25189 248 aa11.68□□□□□ -0.54
SIPA1L3-201ENST00000222345 TNFRSF14Q92956 283 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms