RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 WSB1Q9Y6I7 421 aa12.9□□□□□ -0.34
LIM2-201ENST00000221973 C13orf42A0A1B0GVH6 325 aa12.89□□□□□ -0.35
LIM2-201ENST00000221973 FAM25EA8MYX2 175 aa12.89□□□□□ -0.35
LIM2-201ENST00000221973 IFNA17P01571 189 aa12.89□□□□□ -0.35
LIM2-201ENST00000221973 FGF2P09038 288 aa12.89□□□□□ -0.35
LIM2-201ENST00000221973 ECSCRQ19T08 205 aa12.89□□□□□ -0.35
LIM2-201ENST00000221973 OR1S1Q8NH92 325 aa12.89□□□□□ -0.35
LIM2-201ENST00000221973 A0A1B0GW64 132 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 C5orf51A6NDU8 294 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 HMX3A6NHT5 357 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 CGB1A6NKQ9 187 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 G3V318 75 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 GOSR2O14653 212 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 IGF1P05019 195 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 TRAPPC2P0DI81 140 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 TRAPPC2BP0DI82 140 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 HSPE1P61604 102 aaKnown RBP12.88□□□□□ -0.35
LIM2-201ENST00000221973 SPINK9Q5DT21 86 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 UNQ5815/PRO19632Q6UWF5 114 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 ZNF429Q86V71 674 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 STPG2Q8N412 459 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 LFNGQ8NES3 379 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 OR5B3Q8NH48 314 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 OR10C1Q96KK4 312 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 SPIN2AQ99865 258 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 SPIN2BQ9BPZ2 258 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 PDCD10Q9BUL8 212 aa12.88□□□□□ -0.35
LIM2-201ENST00000221973 TRAV41A0A0B4J266 112 aa12.87□□□□□ -0.35
LIM2-201ENST00000221973 TEX22C9J3V5 150 aa12.87□□□□□ -0.35
LIM2-201ENST00000221973 SLC25A6P12236 298 aa12.87□□□□□ -0.35
LIM2-201ENST00000221973 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
LIM2-201ENST00000221973 IAH1Q2TAA2 248 aaPredicted RBP12.87□□□□□ -0.35
LIM2-201ENST00000221973 OR10W1Q8NGF6 305 aa12.87□□□□□ -0.35
LIM2-201ENST00000221973 NDUFA4L2Q9NRX3 87 aa12.87□□□□□ -0.35
LIM2-201ENST00000221973 COA4Q9NYJ1 87 aa12.87□□□□□ -0.35
LIM2-201ENST00000221973 ZNF257Q9Y2Q1 563 aa12.87□□□□□ -0.35
LIM2-201ENST00000221973 M0QZ24 198 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 PITX3O75364 302 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 SIX6O95475 246 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 TSPAN15O95858 294 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 CRIP2P52943 208 aaPredicted RBP12.86□□□□□ -0.35
LIM2-201ENST00000221973 AARDQ4LEZ3 155 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 ASPHD1Q5U4P2 390 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 GSG1LQ6UXU4 331 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 CENPVQ7Z7K6 275 aaPredicted RBP12.86□□□□□ -0.35
LIM2-201ENST00000221973 ZNF329Q86UD4 541 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 MED28Q9H204 178 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 GSKIPQ9P0R6 139 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 MGAT4CQ9UBM8 478 aa12.86□□□□□ -0.35
LIM2-201ENST00000221973 AREGP15514 252 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 SPCS3P61009 180 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 PRCDQ00LT1 54 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 AKIRIN2Q53H80 203 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 CXorf66Q5JRM2 361 aaPredicted RBP12.85□□□□□ -0.35
LIM2-201ENST00000221973 C10orf99Q6UWK7 81 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 KLHDC1Q8N7A1 406 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 ZBTB8BQ8NAP8 495 aaPredicted RBP12.85□□□□□ -0.35
LIM2-201ENST00000221973 OR5T1Q8NG75 326 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 C2orf50Q96LR7 162 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 WNT10AQ9GZT5 417 aa12.85□□□□□ -0.35
LIM2-201ENST00000221973 A0A1W2PN81 502 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 IGLC7A0M8Q6 106 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 PSMB11A5LHX3 300 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 CEBPZOSA8MTT3 80 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 REG1AP05451 166 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 CHRNA7P36544 502 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 HOXA1P49639 335 aaPredicted RBP12.84□□□□□ -0.35
LIM2-201ENST00000221973 TNFRSF9Q07011 255 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 C19orf54Q5BKX5 351 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 Q6ZNX1 250 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 OR4D5Q8NGN0 318 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 OR5M8Q8NGP6 311 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 OR52E5Q8NH55 327 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 GON7Q9BXV9 100 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 PLEKHA3Q9HB20 300 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 ZNF580Q9UK33 172 aa12.84□□□□□ -0.35
LIM2-201ENST00000221973 SCGB1D2O95969 90 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 OR13C7P0DN81 318 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 SLC35B1P78383 322 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 CFHR3Q02985 330 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 WT1-ASQ06250 92 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 FCN2Q15485 313 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 TMEM68Q96MH6 324 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 SRSF8Q9BRL6 282 aaKnown RBP12.83□□□□□ -0.36
LIM2-201ENST00000221973 MAGT1Q9H0U3 335 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 RBKSQ9H477 322 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 ENY2Q9NPA8 101 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 CACFD1Q9UGQ2 172 aa12.83□□□□□ -0.36
LIM2-201ENST00000221973 FAM90A26D6RGX4 464 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 SOX15O60248 233 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 CXCL3P19876 107 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 PSMB6P28072 239 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 PPIFP30405 207 aaKnown RBP12.82□□□□□ -0.36
LIM2-201ENST00000221973 NKX2-1P43699 371 aaPredicted RBP12.82□□□□□ -0.36
LIM2-201ENST00000221973 H2BFSP57053 126 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 RRAS2P62070 204 aaPredicted RBP12.82□□□□□ -0.36
LIM2-201ENST00000221973 C11orf87Q6NUJ2 197 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 C19orf35Q6ZS72 473 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 HSD17B13Q7Z5P4 300 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms