RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 TRGV8A0A0C4DH27 118 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 OR4A8P0C604 315 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 TCF23Q7RTU1 214 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 VKORC1L1Q8N0U8 176 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 RND1Q92730 232 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 MS4A5Q9H3V2 200 aa18.21■□□□□ 0.51
CCDC9-201ENST00000221922 NDUFB4O95168 129 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 STAG3L2P0CL84 134 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 STAG3L3P0CL85 134 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 PAX1P15863 534 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 UBE2G2P60604 165 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 CST9LP1Q5W188 147 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 LYG1Q8N1E2 194 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 FAM216BQ8N7L0 139 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 C14orf144Q96I85 54 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 VKORC1Q9BQB6 163 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 GGTLC1Q9BX51 225 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 PIEZO2Q9H5I5 2752 aa18.2■□□□□ 0.5
CCDC9-201ENST00000221922 DCHS1Q96JQ0 3298 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 hADV38S2A0JD32 116 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 C15orf61A6NNL5 157 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 C17orf100A8MU93 164 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 GZMBP10144 247 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 CHRNA7P36544 502 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 TMEM144Q7Z5S9 345 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 PATZ1Q9HBE1 687 aaKnown RBP18.19■□□□□ 0.5
CCDC9-201ENST00000221922 FUT9Q9Y231 359 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 TCF19Q9Y242 345 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 PTPRQQ9UMZ3 2332 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 TRAV3A0A0B4J244 114 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 TSTD3H0UI37 97 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 C1orf229Q6ZS94 237 aaPredicted RBP18.19■□□□□ 0.5
CCDC9-201ENST00000221922 BTF3L4Q96K17 158 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 LSM4Q9Y4Z0 139 aaKnown RBP18.19■□□□□ 0.5
CCDC9-201ENST00000221922 PXMP4Q9Y6I8 212 aa18.19■□□□□ 0.5
CCDC9-201ENST00000221922 DDTP30046 118 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 UTF1Q5T230 341 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 TMEM37Q8WXS4 190 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 RHOVQ96L33 236 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 DERL1Q9BUN8 251 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 RPUSD1Q9UJJ7 312 aaKnown RBP18.18■□□□□ 0.5
CCDC9-201ENST00000221922 FOXA2Q9Y261 457 aaPredicted RBP18.18■□□□□ 0.5
CCDC9-201ENST00000221922 LINC00312Q9Y6C7 94 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 VSTM5A8MXK1 200 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 CXorf1O96002 111 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 ARL14EPLP0DKL9 152 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 CCL8P80075 99 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 FOXL1Q12952 345 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 POU2AF1Q16633 256 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 ABHD12Q8N2K0 398 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 OR5T1Q8NG75 326 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 C1orf159Q96HA4 380 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 NGBQ9NPG2 151 aa18.18■□□□□ 0.5
CCDC9-201ENST00000221922 IL3RAP26951 378 aa18.17■□□□□ 0.5
CCDC9-201ENST00000221922 RPL15P61313 204 aaKnown RBP18.17■□□□□ 0.5
CCDC9-201ENST00000221922 FAM78BQ5VT40 261 aa18.17■□□□□ 0.5
CCDC9-201ENST00000221922 MIC13Q5XKP0 118 aa18.17■□□□□ 0.5
CCDC9-201ENST00000221922 OR4A47Q6IF82 309 aa18.17■□□□□ 0.5
CCDC9-201ENST00000221922 SLC25A48Q6ZT89 311 aaKnown RBP18.16■□□□□ 0.5
CCDC9-201ENST00000221922 REC114Q7Z4M0 266 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 WFIKKN1Q96NZ8 548 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 TMEM14BQ9NUH8 114 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 YLPM1P49750 1951 aaKnown RBP18.16■□□□□ 0.5
CCDC9-201ENST00000221922 GCGP01275 180 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 NDUFB7P17568 137 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 GNG10P50151 68 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 HSPE1P61604 102 aaKnown RBP18.16■□□□□ 0.5
CCDC9-201ENST00000221922 MEF2CQ06413 473 aaPredicted RBP18.16■□□□□ 0.5
CCDC9-201ENST00000221922 ZNF114Q8NC26 417 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 GAL3ST2Q9H3Q3 398 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 CHODLQ9H9P2 273 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 NPVFQ9HCQ7 196 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 ENY2Q9NPA8 101 aa18.16■□□□□ 0.5
CCDC9-201ENST00000221922 C1QTNF9P0C862 333 aa18.15■□□□□ 0.5
CCDC9-201ENST00000221922 PRO1933Q9H354 126 aa18.15■□□□□ 0.5
CCDC9-201ENST00000221922 DCAF16Q9NXF7 216 aa18.15■□□□□ 0.5
CCDC9-201ENST00000221922 TRBV20OR9-2A0A075B6H5 130 aa18.14■□□□□ 0.5
CCDC9-201ENST00000221922 SFRP2Q96HF1 295 aa18.14■□□□□ 0.5
CCDC9-201ENST00000221922 AURKAIP1Q9NWT8 199 aaPredicted RBP18.14■□□□□ 0.5
CCDC9-201ENST00000221922 SLC25A10Q9UBX3 287 aaPredicted RBP18.14■□□□□ 0.5
CCDC9-201ENST00000221922 RTL8BQ17RB0 113 aa18.14■□□□□ 0.49
CCDC9-201ENST00000221922 SAP30LQ9HAJ7 183 aa18.14■□□□□ 0.49
CCDC9-201ENST00000221922 RAXQ9Y2V3 346 aa18.14■□□□□ 0.49
CCDC9-201ENST00000221922 A0A087X0M5 115 aa18.13■□□□□ 0.49
CCDC9-201ENST00000221922 A0A1B0GX30 115 aa18.13■□□□□ 0.49
CCDC9-201ENST00000221922 CNN1P51911 297 aaKnown RBP18.13■□□□□ 0.49
CCDC9-201ENST00000221922 PRSS8Q16651 343 aa18.13■□□□□ 0.49
CCDC9-201ENST00000221922 ARSJQ5FYB0 599 aaPredicted RBP18.13■□□□□ 0.49
CCDC9-201ENST00000221922 ZCCHC14Q8WYQ9 949 aaKnown RBP18.13■□□□□ 0.49
CCDC9-201ENST00000221922 PRNDQ9UKY0 176 aa18.13■□□□□ 0.49
CCDC9-201ENST00000221922 MMP23AO75900 390 aa18.13■□□□□ 0.49
CCDC9-201ENST00000221922 IL6RP08887 468 aaPredicted RBP18.13■□□□□ 0.49
CCDC9-201ENST00000221922 SLC24A4Q8NFF2 622 aa18.13■□□□□ 0.49
CCDC9-201ENST00000221922 TMEM18Q96B42 140 aa18.13■□□□□ 0.49
CCDC9-201ENST00000221922 A0A0U1RQK1 487 aa18.12■□□□□ 0.49
CCDC9-201ENST00000221922 ZNF320A2RRD8 509 aa18.12■□□□□ 0.49
CCDC9-201ENST00000221922 PGPEP1LA6NFU8 196 aa18.12■□□□□ 0.49
CCDC9-201ENST00000221922 NPY1RP25929 384 aa18.12■□□□□ 0.49
CCDC9-201ENST00000221922 TLN1Q9Y490 2541 aaKnown RBP18.12■□□□□ 0.49
CCDC9-201ENST00000221922 PPIAL4EA0A075B759 164 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms