RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 EIF3GO75821 320 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMPD3-201ENST00000219334 KLK2P20151 261 aa15.94■□□□□ 0.14
SMPD3-201ENST00000219334 LBHQ53QV2 105 aaPredicted RBP15.94■□□□□ 0.14
SMPD3-201ENST00000219334 SPRR3Q9UBC9 169 aa15.94■□□□□ 0.14
SMPD3-201ENST00000219334 A0A087X0M5 115 aa15.94■□□□□ 0.14
SMPD3-201ENST00000219334 A0A1B0GX30 115 aa15.94■□□□□ 0.14
SMPD3-201ENST00000219334 RNASE1P07998 156 aaKnown RBP15.94■□□□□ 0.14
SMPD3-201ENST00000219334 TRGV2A0A075B6R0 118 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 TMEM133Q9H2Q1 129 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 ESPL1Q14674 2120 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 PROB1E7EW31 1015 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 AICDAQ9GZX7 198 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 TRAV24A0A0B4J272 114 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 M0R381 172 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 WBP1Q96G27 269 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 HSPB9Q9BQS6 159 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 PSMG3Q9BT73 122 aaPredicted RBP15.93■□□□□ 0.14
SMPD3-201ENST00000219334 MDC1Q14676 2089 aaKnown RBP15.93■□□□□ 0.14
SMPD3-201ENST00000219334 LYNX1G3V0Z9 82 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 LYNX1P0DP58 116 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 AGAP20933 346 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 C2orf68Q2NKX9 166 aa15.93■□□□□ 0.14
SMPD3-201ENST00000219334 ZCCHC24Q8N2G6 241 aaKnown RBP15.93■□□□□ 0.14
SMPD3-201ENST00000219334 MRPL18Q9H0U6 180 aaKnown RBP15.93■□□□□ 0.14
SMPD3-201ENST00000219334 TIMP3P35625 211 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 GGCTO75223 188 aaKnown RBP15.92■□□□□ 0.14
SMPD3-201ENST00000219334 F12P00748 615 aaPredicted RBP15.92■□□□□ 0.14
SMPD3-201ENST00000219334 RNASEH2CQ8TDP1 164 aaKnown RBP15.92■□□□□ 0.14
SMPD3-201ENST00000219334 RIF1Q5UIP0 2472 aaKnown RBP15.92■□□□□ 0.14
SMPD3-201ENST00000219334 IGHV3OR16-8A0A075B7F1 116 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 OR10AG1Q8NH19 301 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 TRAF4Q9BUZ4 470 aaPredicted RBP15.92■□□□□ 0.14
SMPD3-201ENST00000219334 ACACAQ13085 2346 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 IGLV3-32A0A0A0MS00 114 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 TCRBV4S1A1TA0A5B7 111 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 PQLC2LA1A4F0 135 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 IL18BPO95998 194 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 ZNF660Q6AZW8 331 aaPredicted RBP15.92■□□□□ 0.14
SMPD3-201ENST00000219334 LINC00114Q6XXX2 140 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 RPRMQ9NS64 109 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 TET1Q8NFU7 2136 aa15.92■□□□□ 0.14
SMPD3-201ENST00000219334 CACNG8Q8WXS5 425 aa15.91■□□□□ 0.14
SMPD3-201ENST00000219334 GPX4P36969 197 aaPredicted RBP15.91■□□□□ 0.14
SMPD3-201ENST00000219334 RND3P61587 244 aa15.91■□□□□ 0.14
SMPD3-201ENST00000219334 STHQ8IWL8 128 aa15.91■□□□□ 0.14
SMPD3-201ENST00000219334 PLSCR2Q9NRY7 297 aa15.91■□□□□ 0.14
SMPD3-201ENST00000219334 IGHV1-18A0A0C4DH31 117 aa15.91■□□□□ 0.14
SMPD3-201ENST00000219334 ZNF385CQ66K41 422 aaPredicted RBP15.91■□□□□ 0.14
SMPD3-201ENST00000219334 HLA-DRB1P01911 266 aa15.91■□□□□ 0.14
SMPD3-201ENST00000219334 IFITM3Q01628 133 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 IGFBP2P18065 325 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 GNLYP22749 145 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 FAM209BQ5JX69 171 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 WDR82Q6UXN9 313 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 DOPEY2Q9Y3R5 2298 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 UCP1P25874 307 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 CRIPAKQ8N1N5 446 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 MRAP2Q96G30 205 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 DMRTA2Q96SC8 542 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 NPCDR1Q9BY65 106 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 TRAV40A0A0B4J280 105 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 LOC107984156A0A0G2JMH3 177 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 ZNF25P17030 456 aaPredicted RBP15.9■□□□□ 0.14
SMPD3-201ENST00000219334 ARL17AQ8IVW1 177 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 OR4D5Q8NGN0 318 aa15.9■□□□□ 0.14
SMPD3-201ENST00000219334 PINLYPA6NC86 204 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 CENPWQ5EE01 88 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 LDLRAD2Q5SZI1 272 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 ERASQ7Z444 233 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 PARLQ9H300 379 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 EFNA4P52798 201 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 C20orf204Q6ZNR8 217 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 OR52E5Q8NH55 327 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 MRPL13Q9BYD1 178 aaKnown RBP15.89■□□□□ 0.13
SMPD3-201ENST00000219334 YPEL1O60688 119 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 ZNF383Q8NA42 475 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 YPEL2Q96QA6 119 aa15.89■□□□□ 0.13
SMPD3-201ENST00000219334 ALKBH7Q9BT30 221 aaPredicted RBP15.89■□□□□ 0.13
SMPD3-201ENST00000219334 NMBP08949 121 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 DANCRP0C864 163 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 SRIP30626 198 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 OR13C6PQ8NH95 151 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 RARRES2Q99969 163 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 WNT2P09544 360 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 SAA1P0DJI8 122 aaPredicted RBP15.88■□□□□ 0.13
SMPD3-201ENST00000219334 PAX1P15863 534 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 PRB3Q04118 309 aaPredicted RBP15.88■□□□□ 0.13
SMPD3-201ENST00000219334 PMCHL1Q16048 86 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 HIST1H4GQ99525 98 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 PLPPR1Q8TBJ4 325 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 SAA2-SAA4A0A096LPE2 208 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 SAA2P0DJI9 122 aaPredicted RBP15.88■□□□□ 0.13
SMPD3-201ENST00000219334 HINT1P49773 126 aaPredicted RBP15.88■□□□□ 0.13
SMPD3-201ENST00000219334 A0A1B0GTI1 187 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 TRGC2P03986 189 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 ARL6IP6Q8N6S5 226 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 FLVCR1-AS1Q8TAF5 88 aa15.88■□□□□ 0.13
SMPD3-201ENST00000219334 SMIM6P0DI80 62 aa15.87■□□□□ 0.13
SMPD3-201ENST00000219334 H2BFSP57053 126 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms