RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 UNQ5815/PRO19632Q6UWF5 114 aa21.43■■□□□ 1.02
CHMP4B-201ENST00000217402 ZBTB8BQ8NAP8 495 aaPredicted RBP21.43■■□□□ 1.02
CHMP4B-201ENST00000217402 TET2Q6N021 2002 aaPredicted RBP21.43■■□□□ 1.02
CHMP4B-201ENST00000217402 PRCDQ00LT1 54 aa21.42■■□□□ 1.02
CHMP4B-201ENST00000217402 FCN2Q15485 313 aa21.42■■□□□ 1.02
CHMP4B-201ENST00000217402 CXorf66Q5JRM2 361 aaPredicted RBP21.42■■□□□ 1.02
CHMP4B-201ENST00000217402 ASPHD1Q5U4P2 390 aa21.42■■□□□ 1.02
CHMP4B-201ENST00000217402 PLEKHA3Q9HB20 300 aa21.41■■□□□ 1.02
CHMP4B-201ENST00000217402 SCGB1D2O95969 90 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 REG1AP05451 166 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 AREGP15514 252 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 HOXA1P49639 335 aaPredicted RBP21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 CRIP2P52943 208 aaPredicted RBP21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 SPCS3P61009 180 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 RRAS2P62070 204 aaPredicted RBP21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 TNFRSF9Q07011 255 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 TMEM267Q0VDI3 215 aaPredicted RBP21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 OR4D5Q8NGN0 318 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 OR52E5Q8NH55 327 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 HSPB7Q9UBY9 170 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 IGLC7A0M8Q6 106 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 CLPSL1A2RUU4 121 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 CXCL3P19876 107 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 H2BFSP57053 126 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 ZNF329Q86UD4 541 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 C2orf50Q96LR7 162 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 RNF114Q9Y508 228 aa21.4■■□□□ 1.02
CHMP4B-201ENST00000217402 CEBPZOSA8MTT3 80 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 HAX1O00165 279 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 WT1-ASQ06250 92 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 AKIRIN2Q53H80 203 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 C10orf99Q6UWK7 81 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 OR5T1Q8NG75 326 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 OR11H7Q8NGC8 314 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 C19orf24Q9BVV8 132 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 MAGT1Q9H0U3 335 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 ZNF580Q9UK33 172 aa21.39■■□□□ 1.01
CHMP4B-201ENST00000217402 hCG_2014768A0A024R1R8 64 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 A0A1W2PN81 502 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 OR13C7P0DN81 318 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 CHRNA7P36544 502 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 C19orf54Q5BKX5 351 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 C11orf87Q6NUJ2 197 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 C19orf35Q6ZS72 473 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 CENPVQ7Z7K6 275 aaPredicted RBP21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 KLHDC1Q8N7A1 406 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 WNT10AQ9GZT5 417 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 RBKSQ9H477 322 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 ENY2Q9NPA8 101 aa21.38■■□□□ 1.01
CHMP4B-201ENST00000217402 PSMB11A5LHX3 300 aa21.37■■□□□ 1.01
CHMP4B-201ENST00000217402 NKX2-1P43699 371 aaPredicted RBP21.37■■□□□ 1.01
CHMP4B-201ENST00000217402 CACFD1Q9UGQ2 172 aa21.37■■□□□ 1.01
CHMP4B-201ENST00000217402 FOXL1Q12952 345 aa21.37■■□□□ 1.01
CHMP4B-201ENST00000217402 PDLIM3Q53GG5 364 aaPredicted RBP21.37■■□□□ 1.01
CHMP4B-201ENST00000217402 WDR89Q96FK6 387 aaPredicted RBP21.37■■□□□ 1.01
CHMP4B-201ENST00000217402 SRSF8Q9BRL6 282 aaKnown RBP21.37■■□□□ 1.01
CHMP4B-201ENST00000217402 GON7Q9BXV9 100 aa21.37■■□□□ 1.01
CHMP4B-201ENST00000217402 FAM90A26D6RGX4 464 aa21.36■■□□□ 1.01
CHMP4B-201ENST00000217402 CFHR3Q02985 330 aa21.36■■□□□ 1.01
CHMP4B-201ENST00000217402 TMEM68Q96MH6 324 aa21.36■■□□□ 1.01
CHMP4B-201ENST00000217402 SOX15O60248 233 aa21.35■■□□□ 1.01
CHMP4B-201ENST00000217402 PPIFP30405 207 aaKnown RBP21.35■■□□□ 1.01
CHMP4B-201ENST00000217402 POLR2GP62487 172 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHMP4B-201ENST00000217402 SLC35B1P78383 322 aa21.35■■□□□ 1.01
CHMP4B-201ENST00000217402 HSD17B13Q7Z5P4 300 aaPredicted RBP21.35■■□□□ 1.01
CHMP4B-201ENST00000217402 DTD1Q8TEA8 209 aa21.35■■□□□ 1.01
CHMP4B-201ENST00000217402 TMEM158Q8WZ71 300 aa21.35■■□□□ 1.01
CHMP4B-201ENST00000217402 TMEM89A2RUT3 159 aa21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 MBPP02686 304 aaPredicted RBP21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 PSMB6P28072 239 aa21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 PROK1P58294 105 aa21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 ID3Q02535 119 aa21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 MRPL41Q8IXM3 137 aaKnown RBP21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 TTC9CQ8N5M4 171 aa21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 FAM110DQ8TAY7 271 aaPredicted RBP21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 HEYLQ9NQ87 328 aaPredicted RBP21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 FBN1P35555 2871 aaKnown RBP21.34■■□□□ 1.01
CHMP4B-201ENST00000217402 A0A1B0GVG6 124 aa21.33■■□□□ 1.01
CHMP4B-201ENST00000217402 WRBO00258 174 aa21.33■■□□□ 1.01
CHMP4B-201ENST00000217402 PRH1P02810 166 aa21.33■■□□□ 1.01
CHMP4B-201ENST00000217402 IAPPP10997 89 aa21.33■■□□□ 1.01
CHMP4B-201ENST00000217402 S100A10P60903 97 aa21.33■■□□□ 1.01
CHMP4B-201ENST00000217402 ZNF355PQ9NSJ1 428 aa21.33■■□□□ 1.01
CHMP4B-201ENST00000217402 A0A1B0GUS0 222 aa21.33■■□□□ 1
CHMP4B-201ENST00000217402 NPIPB5A8MRT5 1133 aa21.33■■□□□ 1
CHMP4B-201ENST00000217402 SYNGR2O43760 224 aa21.33■■□□□ 1
CHMP4B-201ENST00000217402 SSSCA1O60232 199 aa21.33■■□□□ 1
CHMP4B-201ENST00000217402 AWAT1Q58HT5 328 aa21.33■■□□□ 1
CHMP4B-201ENST00000217402 OR2C3Q8N628 320 aa21.33■■□□□ 1
CHMP4B-201ENST00000217402 NMES1Q9C002 83 aa21.33■■□□□ 1
CHMP4B-201ENST00000217402 LSM5Q9Y4Y9 91 aaKnown RBP21.33■■□□□ 1
CHMP4B-201ENST00000217402 FBXO24O75426 580 aa21.32■■□□□ 1
CHMP4B-201ENST00000217402 MED6O75586 246 aa21.32■■□□□ 1
CHMP4B-201ENST00000217402 CTRB1P17538 263 aa21.32■■□□□ 1
CHMP4B-201ENST00000217402 ERHP84090 104 aaKnown RBP21.32■■□□□ 1
CHMP4B-201ENST00000217402 IL15RAQ13261 267 aa21.32■■□□□ 1
CHMP4B-201ENST00000217402 CTRB2Q6GPI1 263 aa21.32■■□□□ 1
CHMP4B-201ENST00000217402 OR5AU1Q8NGC0 362 aa21.32■■□□□ 1
CHMP4B-201ENST00000217402 HIPK2Q9H2X6 1198 aa21.32■■□□□ 1
CHMP4B-201ENST00000217402 DEFA4P12838 97 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms