RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 LCNL1Q6ZST4 164 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 BPIFA4PQ86YQ2 179 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 C5orf52A6NGY3 159 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 SELLP14151 372 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 COMPP49747 757 aaPredicted RBP11.49□□□□□ -0.57
SIX4-201ENST00000216513 ZNF343Q6P1L6 599 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 UQCC3Q6UW78 93 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 OR10G8Q8NGN5 311 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 SLC25A38Q96DW6 304 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 NEU1Q99519 415 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 TRBV5-5A0A0J9YX44 114 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 P2RY1P47900 373 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 A0A0G2JK05 382 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 VN1R17PQ8TDU5 208 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 HKR1P10072 659 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 CRISP2P16562 243 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 ZNF818PQ6ZRF7 136 aa11.49□□□□□ -0.57
SIX4-201ENST00000216513 MPTX1A8MV57 137 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 H3BVH4 76 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 SIAH2O43255 324 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 PGA5P0DJD9 388 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 ZP1P60852 638 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 KIAA1644Q3SXP7 199 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 C5orf24Q7Z6I8 188 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 C21orf62Q9NYP8 219 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 NLRC5Q86WI3 1866 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 NDUFB4O95168 129 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 NPIPB3Q92617 1050 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 AKAP6Q13023 2319 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 DUXBA0A1W2PPF3 345 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 LAIR2Q6ISS4 152 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 Q6ZN92 141 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 C7orf77A4D0Y5 90 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 GRNP28799 593 aaKnown RBP11.48□□□□□ -0.57
SIX4-201ENST00000216513 DEFB113Q30KQ7 82 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 FAM74A4Q5TZK3 123 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 DOCK4Q8N1I0 1966 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 GBF1Q92538 1859 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 ATOH7Q8N100 152 aa11.48□□□□□ -0.57
SIX4-201ENST00000216513 GSX1Q9H4S2 264 aaPredicted RBP11.48□□□□□ -0.57
SIX4-201ENST00000216513 LDLRAD4O15165 306 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 CA2P00918 260 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 MEOX2P50222 304 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 NAT8Q9UHE5 227 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 GATA4P43694 442 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 PXMP4Q9Y6I8 212 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 IGSF23A1L1A6 192 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 MYOD1P15172 320 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 SULT1A2P50226 295 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 HLA-DRB5Q30154 266 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 WNT10AQ9GZT5 417 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 C21orf62-AS1Q17RA5 79 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 ZNF585BQ52M93 769 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 ASPHD2Q6ICH7 369 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 ZNF383Q8NA42 475 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 TCF19Q9Y242 345 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 TRGV2A0A075B6R0 118 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 TMEM218A2RU14 115 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 C9JCJ5 164 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 RNASE1P07998 156 aaKnown RBP11.47□□□□□ -0.57
SIX4-201ENST00000216513 TMEM183BQ1AE95 376 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 OR11H4Q8NGC9 324 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 PGLYRP4Q96LB8 373 aa11.47□□□□□ -0.57
SIX4-201ENST00000216513 LILRA1O75019 489 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 CLPSP04118 112 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 BTF3P20290 206 aaKnown RBP11.46□□□□□ -0.57
SIX4-201ENST00000216513 RHOGP84095 191 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 HSD17B13Q7Z5P4 300 aaPredicted RBP11.46□□□□□ -0.57
SIX4-201ENST00000216513 LHFPL5Q8TAF8 219 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 PTX4Q96A99 478 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 GPR146Q96CH1 333 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 SMIM12Q96EX1 92 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 SPTAN1Q13813 2472 aaKnown RBP11.46□□□□□ -0.57
SIX4-201ENST00000216513 IGHV2-26A0A0B4J1V2 119 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 TRAV41A0A0B4J266 112 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 B3GALT5-AS1P59052 145 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 OR5AU1Q8NGC0 362 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 SEC11CQ9BY50 192 aa11.46□□□□□ -0.57
SIX4-201ENST00000216513 MRPL13Q9BYD1 178 aaKnown RBP11.46□□□□□ -0.57
SIX4-201ENST00000216513 TMEM200BQ69YZ2 307 aa11.46□□□□□ -0.58
SIX4-201ENST00000216513 TBX15Q96SF7 602 aa11.46□□□□□ -0.58
SIX4-201ENST00000216513 PQLC2LA1A4F0 135 aa11.46□□□□□ -0.58
SIX4-201ENST00000216513 RPL35AP18077 110 aaKnown RBP11.46□□□□□ -0.58
SIX4-201ENST00000216513 H2BFSP57053 126 aa11.46□□□□□ -0.58
SIX4-201ENST00000216513 MRPL30Q8TCC3 161 aaKnown RBP11.46□□□□□ -0.58
SIX4-201ENST00000216513 SAA2-SAA4A0A096LPE2 208 aa11.45□□□□□ -0.58
SIX4-201ENST00000216513 SAA2P0DJI9 122 aaPredicted RBP11.45□□□□□ -0.58
SIX4-201ENST00000216513 TDGF1P13385 188 aa11.45□□□□□ -0.58
SIX4-201ENST00000216513 CLDND2Q8NHS1 167 aa11.45□□□□□ -0.58
SIX4-201ENST00000216513 OSR1Q8TAX0 266 aaPredicted RBP11.45□□□□□ -0.58
SIX4-201ENST00000216513 MRAPQ8TCY5 172 aa11.45□□□□□ -0.58
SIX4-201ENST00000216513 MRPS18AQ9NVS2 196 aaKnown RBP11.45□□□□□ -0.58
SIX4-201ENST00000216513 MFSD2BA6NFX1 497 aa11.45□□□□□ -0.58
SIX4-201ENST00000216513 P2RY4P51582 365 aa11.45□□□□□ -0.58
SIX4-201ENST00000216513 RPL24P83731 157 aaKnown RBP11.45□□□□□ -0.58
SIX4-201ENST00000216513 TCTEX1D1Q8N7M0 179 aa11.45□□□□□ -0.58
SIX4-201ENST00000216513 PLPPR1Q8TBJ4 325 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms