RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 M6PRP20645 277 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 C2orf83Q53S99 150 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 ZNF843Q8N446 348 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 ZNF709Q8N972 641 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 TEX45Q8NA69 505 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 A0A1W2PPI3 338 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 RBFOX3A6NFN3 312 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 FNDC10F2Z333 226 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 ENSAO43768 121 aaKnown RBP14.97□□□□□ -0.01
CTSA-201ENST00000191018 CRYGBP07316 175 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 PPT1P50897 306 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 PAX2Q02962 417 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 ARSJQ5FYB0 599 aaPredicted RBP14.97□□□□□ -0.01
CTSA-201ENST00000191018 MOB3BQ86TA1 216 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 C1orf159Q96HA4 380 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 SPOCK3Q9BQ16 436 aa14.97□□□□□ -0.01
CTSA-201ENST00000191018 LSM4Q9Y4Z0 139 aaKnown RBP14.97□□□□□ -0.01
CTSA-201ENST00000191018 IGHV4-39P01824 125 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 RNASE2P10153 161 aaKnown RBP14.96□□□□□ -0.01
CTSA-201ENST00000191018 HTR1DP28221 377 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 FFAR4Q5NUL3 377 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 TPTE2P1Q5T6R2 138 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 OR10W1Q8NGF6 305 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 CLDND2Q8NHS1 167 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 RARRES2Q99969 163 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 NKX6-2Q9C056 277 aaPredicted RBP14.96□□□□□ -0.01
CTSA-201ENST00000191018 BPESC1Q9GZL8 116 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 NPVFQ9HCQ7 196 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 TPSG1Q9NRR2 321 aa14.96□□□□□ -0.01
CTSA-201ENST00000191018 FLNCQ14315 2725 aa14.96□□□□□ -0.02
CTSA-201ENST00000191018 SOX15O60248 233 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 LMO4P61968 165 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 ZNF787Q6DD87 383 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 DPM3Q9P2X0 92 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 KPTNQ9Y664 436 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 TACC2O95359 2948 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 A0A1W2PN81 502 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 SMCO3A2RU48 225 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 CHRNA7P36544 502 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 KLRD1Q13241 179 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 BTN1A1Q13410 526 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 LCN15Q6UWW0 184 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 MGST2Q99735 147 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 RNF5Q99942 180 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 SLC35B3Q9H1N7 401 aa14.95□□□□□ -0.02
CTSA-201ENST00000191018 USP9XQ93008 2570 aaPredicted RBP14.94□□□□□ -0.02
CTSA-201ENST00000191018 OPRK1P41145 380 aa14.94□□□□□ -0.02
CTSA-201ENST00000191018 PSG5Q15238 335 aa14.94□□□□□ -0.02
CTSA-201ENST00000191018 ZNF506Q5JVG8 444 aa14.94□□□□□ -0.02
CTSA-201ENST00000191018 OR10G4Q8NGN3 311 aa14.94□□□□□ -0.02
CTSA-201ENST00000191018 OR10G9Q8NGN4 311 aa14.94□□□□□ -0.02
CTSA-201ENST00000191018 OR10G7Q8NGN6 311 aa14.94□□□□□ -0.02
CTSA-201ENST00000191018 GGTLC1Q9BX51 225 aa14.94□□□□□ -0.02
CTSA-201ENST00000191018 MAP1LC3B2A6NCE7 125 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 CNTFRP26992 372 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 ERHP84090 104 aaKnown RBP14.93□□□□□ -0.02
CTSA-201ENST00000191018 PMS2P11Q13670 270 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 HABP2Q14520 560 aaPredicted RBP14.93□□□□□ -0.02
CTSA-201ENST00000191018 ICAM4Q14773 271 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 C10orf55Q5SWW7 151 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 MMD2Q8IY49 270 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 MAP1LC3BQ9GZQ8 125 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 SIRPDQ9H106 197 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 CTXND1A0A1B0GTU2 59 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 SNAPINO95295 136 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 CEACAM3P40198 252 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 FGF8P55075 233 aaPredicted RBP14.93□□□□□ -0.02
CTSA-201ENST00000191018 WT1-ASQ06250 92 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 PRSS8Q16651 343 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 HAGHQ16775 308 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 VMO1Q7Z5L0 202 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 CFHR4Q92496 578 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 SLC39A9Q9NUM3 307 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 SIGLEC9Q9Y336 463 aa14.93□□□□□ -0.02
CTSA-201ENST00000191018 IGHV2-70DA0A0C4DH43 119 aa14.92□□□□□ -0.02
CTSA-201ENST00000191018 TIMM23O14925 209 aa14.92□□□□□ -0.02
CTSA-201ENST00000191018 PDLIM4P50479 330 aa14.92□□□□□ -0.02
CTSA-201ENST00000191018 LCN2P80188 198 aa14.92□□□□□ -0.02
CTSA-201ENST00000191018 ACOT6Q3I5F7 207 aaPredicted RBP14.92□□□□□ -0.02
CTSA-201ENST00000191018 TEPPQ6URK8 271 aa14.92□□□□□ -0.02
CTSA-201ENST00000191018 CCL19Q99731 98 aa14.92□□□□□ -0.02
CTSA-201ENST00000191018 COL12A1Q99715 3063 aa14.92□□□□□ -0.02
CTSA-201ENST00000191018 LOC102723971A0A1B0GUV8 181 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 VENTXO95231 258 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 HSPB1P04792 205 aaKnown RBP14.91□□□□□ -0.02
CTSA-201ENST00000191018 KHDC3LQ587J8 217 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 ZFYVE26Q68DK2 2539 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 LHFPL4Q7Z7J7 247 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 ACTR3CQ9C0K3 210 aaPredicted RBP14.91□□□□□ -0.02
CTSA-201ENST00000191018 SEC14L6B5MCN3 397 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 DNASE2O00115 360 aaPredicted RBP14.91□□□□□ -0.02
CTSA-201ENST00000191018 YIF1AO95070 293 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 SRP19P09132 144 aaKnown RBP14.91□□□□□ -0.02
CTSA-201ENST00000191018 HOXB4P17483 251 aaPredicted RBP14.91□□□□□ -0.02
CTSA-201ENST00000191018 MAS1LP35410 378 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 NPBWR1P48145 328 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 SUN5Q8TC36 379 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 SLC25A22Q9H936 323 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 GNG13Q9P2W3 67 aa14.91□□□□□ -0.02
CTSA-201ENST00000191018 AKAP6Q13023 2319 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms