RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ENY2Q9NPA8 101 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 MPV17P39210 176 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 RNASEKQ6P5S7 137 aaKnown RBP16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 LINC00479Q96M42 142 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 DCHS1Q96JQ0 3298 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 IGKV3D-15A0A087WSY6 115 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 H0Y8G0 127 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 TDGF1P13385 188 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 USF1P22415 310 aaPredicted RBP16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 Q0VG73 95 aa16.63■□□□□ 0.25
PPP1R3F-201ENST00000055335 KMT2EQ8IZD2 1858 aa16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 AGFG2O95081 481 aa16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 RAB31Q13636 194 aa16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 FBXW9Q5XUX1 488 aa16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 STUMQ69YW2 141 aa16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 Q8N976 141 aa16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 ZNF331Q9NQX6 463 aaPredicted RBP16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 GFRA3O60609 400 aa16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 SS18L1O75177 396 aaPredicted RBP16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 CEACAM8P31997 349 aaPredicted RBP16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 MRPL49Q13405 166 aaKnown RBP16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 SSBP4Q9BWG4 385 aaPredicted RBP16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 TCF19Q9Y242 345 aa16.62■□□□□ 0.25
PPP1R3F-201ENST00000055335 CRYABP02511 175 aaKnown RBP16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 LPAL2Q16609 132 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 IBA57Q5T440 356 aaKnown RBP16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 TCTEX1D1Q8N7M0 179 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 OR4C5Q8NGB2 326 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 CLEC7AQ9BXN2 247 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 TTTY12Q9BZ98 90 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 TMEM140Q9NV12 185 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 BMPR1BO00238 502 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 APCSP02743 223 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 TMEM251Q8N6I4 163 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 NANOS1Q8WY41 292 aaKnown RBP16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 S1PR3Q99500 378 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 GNB1LQ9BYB4 327 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 LNP1A1A4G5 178 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 MPDU1O75352 247 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 CA2P00918 260 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 FAM173AQ9BQD7 235 aa16.61■□□□□ 0.25
PPP1R3F-201ENST00000055335 SMPD2O60906 423 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 DUTP33316 252 aaKnown RBP16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 TMEM136Q6ZRR5 245 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 KLHDC1Q8N7A1 406 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 SLC24A4Q8NFF2 622 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 Q8TCH9 128 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 TSKUQ8WUA8 353 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 CT55Q8WUE5 264 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 BET1LQ9NYM9 111 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 CDC42EP3Q9UKI2 254 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 PROP1O75360 226 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 MFAP2P55001 183 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 PMCHL1Q16048 86 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 MLANAQ16655 118 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 ZNF439Q8NDP4 499 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 C22orf15Q8WYQ4 148 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 FAM168AQ92567 244 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 SELENOKQ9Y6D0 94 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 TNRC6AQ8NDV7 1962 aaKnown RBP16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 CBY3A6NI87 242 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 M0R2Z0 102 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 TIMM8AO60220 97 aaPredicted RBP16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 NPY1RP25929 384 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 TRIP6Q15654 476 aaKnown RBP16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 SFXN3Q9BWM7 321 aa16.6■□□□□ 0.25
PPP1R3F-201ENST00000055335 TSPOP30536 169 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 SLAQ13239 276 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 DCAF12Q5T6F0 453 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 ZNF355PQ9NSJ1 428 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 IGHV3OR15-7A0A075B7D8 119 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 S100A7P31151 101 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 PRRX1P54821 245 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 CX3CL1P78423 397 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 WDR73Q6P4I2 378 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 NIT1Q86X76 327 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 ZNF738Q8NE65 137 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 TXNDC17Q9BRA2 123 aa16.59■□□□□ 0.25
PPP1R3F-201ENST00000055335 ESDP10768 282 aa16.58■□□□□ 0.25
PPP1R3F-201ENST00000055335 CTRLP40313 264 aa16.58■□□□□ 0.25
PPP1R3F-201ENST00000055335 TNXAQ16473 311 aa16.58■□□□□ 0.25
PPP1R3F-201ENST00000055335 IL19Q9UHD0 177 aa16.58■□□□□ 0.25
PPP1R3F-201ENST00000055335 RPH3ALQ9UNE2 315 aa16.58■□□□□ 0.25
PPP1R3F-201ENST00000055335 IGHV3-48P01763 117 aa16.58■□□□□ 0.24
PPP1R3F-201ENST00000055335 RPL8P62917 257 aaKnown RBP16.58■□□□□ 0.24
PPP1R3F-201ENST00000055335 UTF1Q5T230 341 aa16.58■□□□□ 0.24
PPP1R3F-201ENST00000055335 SLC35E4Q6ICL7 350 aa16.58■□□□□ 0.24
PPP1R3F-201ENST00000055335 KLF14Q8TD94 323 aaPredicted RBP16.58■□□□□ 0.24
PPP1R3F-201ENST00000055335 MRPL52Q86TS9 123 aaKnown RBP16.58■□□□□ 0.24
PPP1R3F-201ENST00000055335 ALKBH7Q9BT30 221 aaPredicted RBP16.58■□□□□ 0.24
PPP1R3F-201ENST00000055335 TRGV10A0A0A0MS01 117 aa16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 CD24P25063 80 aa16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 TRAT1Q6PIZ9 186 aa16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 EIF4EBP1Q13541 118 aaPredicted RBP16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 LYG1Q8N1E2 194 aa16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 BCL2L2Q92843 193 aaPredicted RBP16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 NABP2Q9BQ15 211 aa16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 CLEC5AQ9NY25 188 aa16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 M0QZ24 198 aa16.57■□□□□ 0.24
PPP1R3F-201ENST00000055335 CDX2Q99626 313 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms