RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 RBFOX2O43251 390 aaKnown RBP eCLIP10.8□□□□□ -0.682e-6■□□□□ 9.3
CTNS-201ENST00000046640 HPRT1P00492 218 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 SAA2P0DJI9 122 aaPredicted RBP10.8□□□□□ -0.68
CTNS-201ENST00000046640 ARL14EPLP0DKL9 152 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 ATP6V1FQ16864 119 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 TMEM140Q9NV12 185 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 SCO2A0A1W2PP80 73 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 SLC17A3O00476 420 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 YPEL1O60688 119 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 ERVK-16P61578 105 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 FOXC1Q12948 553 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 FAM169BQ8N8A8 192 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 RND1Q92730 232 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 YPEL2Q96QA6 119 aa10.8□□□□□ -0.68
CTNS-201ENST00000046640 IGLV3-9A0A075B6K5 115 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 PDLIM3Q53GG5 364 aaPredicted RBP10.79□□□□□ -0.68
CTNS-201ENST00000046640 CIB3Q96Q77 187 aaPredicted RBP10.79□□□□□ -0.68
CTNS-201ENST00000046640 SFXN3Q9BWM7 321 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 ZZEF1O43149 2961 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 DYSFO75923 2080 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 CEACAM8P31997 349 aaPredicted RBP10.79□□□□□ -0.68
CTNS-201ENST00000046640 TRAT1Q6PIZ9 186 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 RNASEH2CQ8TDP1 164 aaKnown RBP10.79□□□□□ -0.68
CTNS-201ENST00000046640 ACY3Q96HD9 319 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 FKBP11Q9NYL4 201 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 ATRXP46100 2492 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 TRBV20OR9-2A0A075B6H5 130 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 TRGV10A0A0A0MS01 117 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 F6UZH7 168 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 PRRG2O14669 202 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 GGCTO75223 188 aaKnown RBP10.79□□□□□ -0.68
CTNS-201ENST00000046640 FRMD6-AS1P0C7T7 363 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 SPATA31B1PQ5VZV4 182 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 CENPVQ7Z7K6 275 aaPredicted RBP10.79□□□□□ -0.68
CTNS-201ENST00000046640 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
CTNS-201ENST00000046640 PARD6GQ9BYG4 376 aaPredicted RBP10.79□□□□□ -0.68
CTNS-201ENST00000046640 ABCA4P78363 2273 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 KBTBD11-OT1A0A1B0GTJ5 212 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 MDFIC2A0A1B0GVS7 189 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 DPRXA6NFQ7 191 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 ACTL6BO94805 426 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 GCGP01275 180 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 CBLN1P23435 193 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 ADMP35318 185 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 CFHR2P36980 270 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 MRPS11P82912 194 aaKnown RBP10.78□□□□□ -0.68
CTNS-201ENST00000046640 BSPH1Q075Z2 132 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 GFRALQ6UXV0 394 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 CCL17Q92583 94 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 FAM122AQ96E09 287 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 GAFA1Q96PS6 74 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 F2RL2O00254 374 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 SRP14P37108 136 aaKnown RBP10.78□□□□□ -0.68
CTNS-201ENST00000046640 RPL29P47914 159 aaKnown RBP10.78□□□□□ -0.68
CTNS-201ENST00000046640 RELBQ01201 579 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 C1orf174Q8IYL3 243 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 GBGT1Q8N5D6 347 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 MS4A10Q96PG2 267 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 MS4A5Q9H3V2 200 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 PTPRQQ9UMZ3 2332 aa10.78□□□□□ -0.68
CTNS-201ENST00000046640 C16orf97H3BN30 126 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 FOXH1O75593 365 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 IRF2P14316 349 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 REG1BP48304 166 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 ZNF705AQ6ZN79 300 aaPredicted RBP10.77□□□□□ -0.69
CTNS-201ENST00000046640 OCC1Q8TAD7 63 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 SFRP2Q96HF1 295 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 IL19Q9UHD0 177 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 RAI1Q7Z5J4 1906 aaPredicted RBP10.77□□□□□ -0.69
CTNS-201ENST00000046640 IGKV1-16P04430 117 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 CCL3L1P16619 93 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 SLC35B1P78383 322 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 PRB3Q04118 309 aaPredicted RBP10.77□□□□□ -0.69
CTNS-201ENST00000046640 HLA-DRB5Q30154 266 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 TDRG1Q3Y452 100 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 KRTCAP3Q53RY4 240 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 ASPHD1Q5U4P2 390 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 STUMQ69YW2 141 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 TMEM108Q6UXF1 575 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 Q8N7P7 452 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 NEUROG1Q92886 237 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 PXMP4Q9Y6I8 212 aa10.77□□□□□ -0.69
CTNS-201ENST00000046640 CGB3P0DN86 165 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 CGB7P0DN87 165 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 TNFSF4P23510 183 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 ZNF90Q03938 601 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 OR5I1Q13606 314 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 IQCJQ1A5X6 159 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 OR4A47Q6IF82 309 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 TREML4Q6UXN2 200 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 TCTEX1D1Q8N7M0 179 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 TBX15Q96SF7 602 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 TCF19Q9Y242 345 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 GFRA3O60609 400 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 C21orf62-AS1Q17RA5 79 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 COA6Q5JTJ3 125 aaKnown RBP10.76□□□□□ -0.69
CTNS-201ENST00000046640 ASCL5Q7RTU5 278 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 Q8NA96 180 aa10.76□□□□□ -0.69
CTNS-201ENST00000046640 MGST2Q99735 147 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms