RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 TMEM230Q96A57 120 aa10.3□□□□□ -0.76
TSPAN9-201ENST00000011898 DEFA4P12838 97 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 MST1LQ2TV78 715 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 LCN12Q6JVE5 192 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 LINC00596Q86U02 117 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 GPR146Q96CH1 333 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 HIST1H4GQ99525 98 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 PRDM14Q9GZV8 571 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 DLL3Q9NYJ7 618 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 THYN1Q9P016 225 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 SLC25A53Q5H9E4 307 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 DOLPP1Q86YN1 238 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 SELENOHQ8IZQ5 122 aaKnown RBP10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 ZNF418Q8TF45 676 aaPredicted RBP10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 C5orf30Q96GV9 206 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 AMY1AP04745 511 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 GZMHP20718 246 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 C1orf174Q8IYL3 243 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 PSMG3Q9BT73 122 aaPredicted RBP10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 HES7Q9BYE0 225 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 ZNF257Q9Y2Q1 563 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 A0A0A6YYD4 124 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 LY6G6EA0A0G2JKS1 128 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 H7C2G1 150 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 C1QTNF9P0C862 333 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 CDKN1BP46527 198 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 GLRX2Q9NS18 164 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 U3KQA8 63 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 OTOGLQ3ZCN5 2332 aa10.29□□□□□ -0.76
TSPAN9-201ENST00000011898 CDX4O14627 284 aaPredicted RBP10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 CLPSP04118 112 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 PKDREJQ9NTG1 2253 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 SYNGR3O43761 229 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 OR2H2O95918 312 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 ESDP10768 282 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 PAX2Q02962 417 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 FGFRL1Q8N441 504 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 ZBTB34Q8NCN2 500 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 OR51G1Q8NGK1 321 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 FLYWCH2Q96CP2 140 aaKnown RBP10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 TRBV9A0A0B4J1U6 114 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 PGPEP1LA6NFU8 196 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 TSPOP30536 169 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 PNKDQ8N490 385 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 FAM89BQ8N5H3 189 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 TEX29Q8N6K0 151 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 ABHD14BQ96IU4 210 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 SCNM1Q9BWG6 230 aa10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
TSPAN9-201ENST00000011898 hCG_38984A0A1B0GV85 526 aa10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 C1QTNF9BB2RNN3 333 aa10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 NTN3O00634 580 aaPredicted RBP10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 CD1BP29016 333 aa10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 CDCP2Q5VXM1 449 aa10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 MRPL14Q6P1L8 145 aaKnown RBP10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 FADS6Q8N9I5 356 aa10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 IMMP1LQ96LU5 166 aa10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 RFNGQ9Y644 331 aa10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 ZNF407Q9C0G0 2248 aa10.27□□□□□ -0.76
TSPAN9-201ENST00000011898 IGKV1D-8A0A087WSZ0 117 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 CRYBB3P26998 211 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 RPL31P62899 125 aaKnown RBP10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 C5orf17Q8NAS9 161 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 TMEM131Q92545 1883 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 PPIAL4EA0A075B759 164 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 A0A1B0GUS0 222 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 PPIAL4FP0DN26 164 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 CD40P25942 277 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 CA7P43166 264 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 HES1Q14469 280 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 ZNF826PQ6ZT77 177 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 Q6ZVH6 145 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 MBD3L1Q8WWY6 194 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 TXNDC17Q9BRA2 123 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 WFDC1Q9HC57 220 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 TMEM242Q9NWH2 141 aa10.27□□□□□ -0.77
TSPAN9-201ENST00000011898 TNFRSF1AP19438 455 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 MRPS11P82912 194 aaKnown RBP10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 RIGQ13278 110 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 PPP1R32Q7Z5V6 425 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 LYZL4Q96KX0 146 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 C20orf144Q9BQM9 153 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 IL36BQ9NZH7 164 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 ADAMTS9Q9P2N4 1935 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 A8MWL6 223 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 LIPFP07098 398 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 GNB1P62873 340 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 INO80CQ6PI98 192 aaPredicted RBP10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 RNF144BQ7Z419 303 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 TIMM9Q9Y5J7 89 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 TMSB15BA0A087X1C1 80 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 FAM90A27PA6NNH2 459 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 ORM2P19652 201 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 TRBV6-7A0A0A0MS04 114 aa10.26□□□□□ -0.77
TSPAN9-201ENST00000011898 IGHV1-69-2A0A0G2JMI3 117 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms