RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 NSD1Q96L73 2696 aaPredicted RBP13.89□□□□□ -0.19
PHGDH-230ENST00000641927 FGF16O43320 207 aa13.89□□□□□ -0.19
PHGDH-230ENST00000641927 CNIH1O95406 144 aa13.89□□□□□ -0.19
PHGDH-230ENST00000641927 IFNA17P01571 189 aa13.89□□□□□ -0.19
PHGDH-230ENST00000641927 MYOD1P15172 320 aa13.89□□□□□ -0.19
PHGDH-230ENST00000641927 C9orf152Q5JTZ5 239 aa13.89□□□□□ -0.19
PHGDH-230ENST00000641927 COA4Q9NYJ1 87 aa13.89□□□□□ -0.19
PHGDH-230ENST00000641927 FKBP11Q9NYL4 201 aa13.89□□□□□ -0.19
PHGDH-230ENST00000641927 M0QZK8 103 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 ST8SIA3O43173 380 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-230ENST00000641927 FOXRED2Q8IWF2 684 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 WDR89Q96FK6 387 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-230ENST00000641927 HINT2Q9BX68 163 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 ESM1Q9NQ30 184 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 FOXA2Q9Y261 457 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-230ENST00000641927 CCNKO75909 580 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
PHGDH-230ENST00000641927 CYCSP99999 105 aaKnown RBP13.88□□□□□ -0.19
PHGDH-230ENST00000641927 MRGPRG-AS1Q2M3A8 158 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 LRRC37A5PQ49AS3 106 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 SPINK9Q5DT21 86 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 ABHD5Q8WTS1 349 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 NMES1Q9C002 83 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 TMEM14BQ9NUH8 114 aa13.88□□□□□ -0.19
PHGDH-230ENST00000641927 FN1P02751 2386 aaKnown RBP13.87□□□□□ -0.19
PHGDH-230ENST00000641927 GPR137BO60478 399 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 PITX3O75364 302 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 HLA-DRB1P01911 266 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 AMY1AP04745 511 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 HNRNPCP07910 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
PHGDH-230ENST00000641927 S100A10P60903 97 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 C10orf55Q5SWW7 151 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 ZNF429Q86V71 674 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 OR4D5Q8NGN0 318 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 MAGT1Q9H0U3 335 aa13.87□□□□□ -0.19
PHGDH-230ENST00000641927 TEX50A0A1B0GTY4 177 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 GIPP09681 153 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-230ENST00000641927 MAS1LP35410 378 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 HILS1P60008 231 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 BLCAPP62952 87 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 CX3CL1P78423 397 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 FXYD3Q14802 87 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 GRPEL2Q8TAA5 225 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 FYTTD1Q96QD9 318 aaKnown RBP13.86□□□□□ -0.19
PHGDH-230ENST00000641927 JMJD8Q96S16 334 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 HSPB9Q9BQS6 159 aa13.86□□□□□ -0.19
PHGDH-230ENST00000641927 RANGRFQ9HD47 186 aaPredicted RBP13.86□□□□□ -0.19
PHGDH-230ENST00000641927 WRBO00258 174 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 MBPP02686 304 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-230ENST00000641927 RPL27AP46776 148 aaKnown RBP13.85□□□□□ -0.19
PHGDH-230ENST00000641927 COMPP49747 757 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-230ENST00000641927 HSPE1P61604 102 aaKnown RBP13.85□□□□□ -0.19
PHGDH-230ENST00000641927 TNFRSF9Q07011 255 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 CD300CQ08708 224 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 ZNF562Q6V9R5 426 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 OR1L8Q8NGR8 309 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 OR5B3Q8NH48 314 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 PPP1R1CQ8WVI7 109 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 ZNF257Q9Y2Q1 563 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 LSM5Q9Y4Y9 91 aaKnown RBP13.85□□□□□ -0.19
PHGDH-230ENST00000641927 CUBNO60494 3623 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 CEBPZOSA8MTT3 80 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 FGF2P09038 288 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 SPCS3P61009 180 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 RAP2BP61225 183 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 POLR2GP62487 172 aaKnown RBP eCLIP13.85□□□□□ -0.19
PHGDH-230ENST00000641927 RAB32Q13637 225 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
PHGDH-230ENST00000641927 ARPC1AQ92747 370 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 FAM103A1Q9BTL3 118 aaKnown RBP13.85□□□□□ -0.19
PHGDH-230ENST00000641927 NPFFR1Q9GZQ6 430 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 HSPB7Q9UBY9 170 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 CACFD1Q9UGQ2 172 aa13.85□□□□□ -0.19
PHGDH-230ENST00000641927 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 FAM181BA6NEQ2 426 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 FAM90A26D6RGX4 464 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 E7EUB6 86 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 CLDN34H7C241 214 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 TRIM77I1YAP6 450 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 TCF21O43680 179 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 SSSCA1O60232 199 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 APELAP0DMC3 54 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 HOXA1P49639 335 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-230ENST00000641927 SRSF4Q08170 494 aaKnown RBP13.84□□□□□ -0.19
PHGDH-230ENST00000641927 OR2T35Q8NGX2 323 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 OR52E5Q8NH55 327 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 ASB13Q8WXK3 278 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 ST6GAL2Q96JF0 529 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 RBKSQ9H477 322 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 PLEKHA3Q9HB20 300 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 ENY2Q9NPA8 101 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 PARP11Q9NR21 331 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 TNCP24821 2201 aa13.84□□□□□ -0.19
PHGDH-230ENST00000641927 MSGN1A6NI15 193 aa13.83□□□□□ -0.2
PHGDH-230ENST00000641927 SSBP2P81877 361 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-230ENST00000641927 ID3Q02535 119 aa13.83□□□□□ -0.2
PHGDH-230ENST00000641927 IL15RAQ13261 267 aa13.83□□□□□ -0.2
PHGDH-230ENST00000641927 AARDQ4LEZ3 155 aa13.83□□□□□ -0.2
PHGDH-230ENST00000641927 ARSJQ5FYB0 599 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms