RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 HILPDAQ9Y5L2 63 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 WSB1Q9Y6I7 421 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 U3KQ87 197 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 ANK2Q01484 3957 aa10.55□□□□□ -0.72
PHGDH-221ENST00000641573 ABCA1O95477 2261 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 CEBPZOSA8MTT3 80 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 OOSP1A8MZH6 123 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 B4DSR2 109 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 TAAR5O14804 337 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 CFDP00746 253 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-221ENST00000641573 IGLV2-23P01705 113 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 LGALS7P47929 136 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 TAS2R30P59541 319 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 SPCS3P61009 180 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 SPINK9Q5DT21 86 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 ZNF767PQ75MW2 155 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 ZNF429Q86V71 674 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 OR8H3Q8N146 312 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 ZNF680Q8NEM1 530 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 DTD1Q8TEA8 209 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 RITA1Q96K30 269 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 SMIM3Q9BZL3 60 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 CACFD1Q9UGQ2 172 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 PRNDQ9UKY0 176 aa10.54□□□□□ -0.72
PHGDH-221ENST00000641573 FOXA2Q9Y261 457 aaPredicted RBP10.54□□□□□ -0.72
PHGDH-221ENST00000641573 TBL2Q9Y4P3 447 aaKnown RBP10.54□□□□□ -0.72
PHGDH-221ENST00000641573 H3BP45 60 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 TIMM23O14925 209 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 KBTBD11O94819 623 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 SPDEFO95238 335 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 IFNA7P01567 189 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 CD1BP29016 333 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 HSPE1P61604 102 aaKnown RBP10.53□□□□□ -0.72
PHGDH-221ENST00000641573 NHLH2Q02577 135 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 LOXL1Q08397 574 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-221ENST00000641573 SSX2Q16385 188 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 VMA21Q3ZAQ7 101 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 PDLIM3Q53GG5 364 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-221ENST00000641573 CCDC144NLQ6NUI1 221 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 OR4A5Q8NH83 315 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 VSTM2AQ8TAG5 236 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 TMEM167AQ8TBQ9 72 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 ST8SIA2Q92186 375 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 CFHR4Q92496 578 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 ZDHHC16Q969W1 377 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 CIB3Q96Q77 187 aaPredicted RBP10.53□□□□□ -0.72
PHGDH-221ENST00000641573 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 NUP50Q9UKX7 468 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 TCF19Q9Y242 345 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 OR51B2Q9Y5P1 312 aa10.53□□□□□ -0.72
PHGDH-221ENST00000641573 TRAV20A0A0B4J274 112 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 CENPVL3A0A0U1RRI6 287 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 CST7O76096 145 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 MYOD1P15172 320 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 BAXQ07812 192 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 TMEM267Q0VDI3 215 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-221ENST00000641573 EXOSC2Q13868 293 aaKnown RBP10.52□□□□□ -0.73
PHGDH-221ENST00000641573 HABP2Q14520 560 aaPredicted RBP10.52□□□□□ -0.73
PHGDH-221ENST00000641573 SPANXN5Q5MJ07 72 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 DYNAPQ8N1N2 210 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 LINC01356Q8N9X3 169 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 C17orf50Q8WW18 174 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 CLCC1Q96S66 551 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 TSNAXQ99598 290 aaKnown RBP10.52□□□□□ -0.73
PHGDH-221ENST00000641573 RNF5Q99942 180 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 WFDC1Q9HC57 220 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 PAIP2BQ9ULR5 123 aaKnown RBP10.52□□□□□ -0.73
PHGDH-221ENST00000641573 AUP1Q9Y679 476 aa10.52□□□□□ -0.73
PHGDH-221ENST00000641573 CR1P17927 2039 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 NPFFO15130 113 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 SLC25A17O43808 307 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 VENTXO95231 258 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 LY86O95711 162 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 FGF2P09038 288 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 TPT1P13693 172 aaKnown RBP10.51□□□□□ -0.73
PHGDH-221ENST00000641573 PAX6P26367 422 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 VDAC2P45880 294 aaPredicted RBP10.51□□□□□ -0.73
PHGDH-221ENST00000641573 SULT1A1P50225 295 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 DYNLT3P51808 116 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 PSG5Q15238 335 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 RPL7L1Q6DKI1 246 aaKnown RBP10.51□□□□□ -0.73
PHGDH-221ENST00000641573 STX12Q86Y82 276 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 TEX45Q8NA69 505 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 STOML3Q8TAV4 291 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 MALSU1Q96EH3 234 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 OR4C12Q96R67 309 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 HIF1ANQ9NWT6 349 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 FKBP11Q9NYL4 201 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 UBQLN2Q9UHD9 624 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 ZNF257Q9Y2Q1 563 aa10.51□□□□□ -0.73
PHGDH-221ENST00000641573 IGHV1-69DA0A0B4J2H0 117 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 TEX50A0A1B0GTY4 177 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 IGKV1D-33P01593 117 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 IGKV1-33P01594 117 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 IGHV1-69P01742 117 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 CRYGBP07316 175 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 METTL15P1P0C7V9 234 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 CNTFRP26992 372 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 SAA4P35542 130 aa10.5□□□□□ -0.73
PHGDH-221ENST00000641573 HOXA1P49639 335 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms