RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 OR2D2Q9H210 308 aa5.71□□□□□ -1.5
SCARB2-226ENST00000640916 Q9N2K0 584 aa5.71□□□□□ -1.5
SCARB2-226ENST00000640916 RABL2AQ9UBK7 228 aaPredicted RBP5.71□□□□□ -1.5
SCARB2-226ENST00000640916 IGKV3-7A0A075B6H7 116 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 TRBV5-7A0A0A0MS05 114 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 A0A0A6YYD4 124 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 OR2T8A6NH00 312 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 KRTAP29-1A8MX34 341 aaPredicted RBP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 NDUFA4O00483 81 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 ATP8B1O43520 1251 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 ACTL6BO94805 426 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 SMR3BP02814 79 aaPredicted RBP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 HIST1H1BP16401 226 aaKnown RBP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 PTBP1P26599 531 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 DUTP33316 252 aaKnown RBP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 FUSP35637 526 aaKnown RBP eCLIP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 FAM3BP58499 235 aaPredicted RBP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 DEFB131AP59861 70 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 MRPL28Q13084 256 aaKnown RBP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 RTL8BQ17RB0 113 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 SERTAD4-AS1Q5TG53 156 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 OR10K2Q6IF99 312 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 MOB1BQ7L9L4 216 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 VKORC1L1Q8N0U8 176 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 CENPSQ8N2Z9 138 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 JAGN1Q8N5M9 183 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 CCDC124Q96CT7 223 aaKnown RBP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 THTPAQ9BU02 230 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 RHPN1-AS1Q9BWJ2 59 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 GABARAPL3Q9BY60 117 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 KRTAP1-5Q9BYS1 174 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 GABARAPL1Q9H0R8 117 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 RNF167Q9H6Y7 350 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 IMPAD1Q9NX62 359 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 AK3Q9UIJ7 227 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 TBC1D24Q9ULP9 559 aa5.7□□□□□ -1.5
SCARB2-226ENST00000640916 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
SCARB2-226ENST00000640916 IGHV3-49A0A0A0MS15 119 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 IGHV7-4-1A0A0J9YVY3 117 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 TCRBV3S1A0A5B6 114 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 C15orf62A8K5M9 175 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 OGG1O15527 345 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 SCGB1D1O95968 90 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 GSTT2P0CG29 244 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 GSTT2BP0CG30 244 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 BTF3P20290 206 aaKnown RBP5.69□□□□□ -1.5
SCARB2-226ENST00000640916 NPY1RP25929 384 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 RPL27AP46776 148 aaKnown RBP5.69□□□□□ -1.5
SCARB2-226ENST00000640916 GBX2P52951 348 aaPredicted RBP5.69□□□□□ -1.5
SCARB2-226ENST00000640916 TMEM41BQ5BJD5 291 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 CT83Q5H943 113 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 LIPKQ5VXJ0 399 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 RPL22L1Q6P5R6 122 aaKnown RBP5.69□□□□□ -1.5
SCARB2-226ENST00000640916 ZNF66Q6ZN08 573 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 CDH26Q8IXH8 852 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 PUSL1Q8N0Z8 303 aaKnown RBP5.69□□□□□ -1.5
SCARB2-226ENST00000640916 GIMAP1Q8WWP7 306 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 C17orf77Q96MU5 243 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 OR2A7Q96R45 310 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 C20orf24Q9BUV8 137 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 OR51E2Q9H255 320 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 KCNK15Q9H427 330 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 CHMP1AQ9HD42 196 aaPredicted RBP5.69□□□□□ -1.5
SCARB2-226ENST00000640916 TMEM14BQ9NUH8 114 aa5.69□□□□□ -1.5
SCARB2-226ENST00000640916 A0A1W2PPK0 400 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 DPPA5A6NC42 116 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 G3V2T6 193 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 DFFBO76075 338 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 KBTBD11O94819 623 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 LALBAP00709 142 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 LIMS3P0CW19 117 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 LIMS4P0CW20 117 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 SPP1P10451 314 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 HOXB6P17509 224 aaKnown RBP5.68□□□□□ -1.5
SCARB2-226ENST00000640916 GABRB1P18505 474 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 BRWD1-AS2P59051 145 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 QRFPP83859 136 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 CBX3Q13185 183 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 UNC119Q13432 240 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 TPBGQ13641 420 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 CCDC58Q4VC31 144 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 OR2G6Q5TZ20 316 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 TMEM88Q6PEY1 159 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 STHQ8IWL8 128 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 TMEM116Q8NCL8 245 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 OR6M1Q8NGM8 313 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 TMEM167AQ8TBQ9 72 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 VN1R17PQ8TDU5 208 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 TRUB1Q8WWH5 349 aaKnown RBP5.68□□□□□ -1.5
SCARB2-226ENST00000640916 TM2D1Q9BX74 207 aa5.68□□□□□ -1.5
SCARB2-226ENST00000640916 IGHV3OR16-13A0A075B7E8 117 aa5.67□□□□□ -1.5
SCARB2-226ENST00000640916 IGHV3-74A0A0B4J1X5 117 aa5.67□□□□□ -1.5
SCARB2-226ENST00000640916 IGLC7A0M8Q6 106 aa5.67□□□□□ -1.5
SCARB2-226ENST00000640916 KNCNA6PVL3 124 aa5.67□□□□□ -1.5
SCARB2-226ENST00000640916 FOXI3A8MTJ6 420 aaPredicted RBP5.67□□□□□ -1.5
SCARB2-226ENST00000640916 ZNF561-AS1K7EIQ3 104 aa5.67□□□□□ -1.5
SCARB2-226ENST00000640916 SOCS1O15524 211 aa5.67□□□□□ -1.5
SCARB2-226ENST00000640916 CREBL2O60519 120 aaPredicted RBP5.67□□□□□ -1.5
SCARB2-226ENST00000640916 TNFRSF6BO95407 300 aa5.67□□□□□ -1.5
SCARB2-226ENST00000640916 DHFRP00374 187 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms