RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 WDR25Q64LD2 544 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-223ENST00000640640 OR4A47Q6IF82 309 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 PRNTQ86SH4 94 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 GATAD1Q8WUU5 269 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 RBM14Q96PK6 669 aaKnown RBP14.76□□□□□ -0.05
SCARB2-223ENST00000640640 IGHV1-18A0A0C4DH31 117 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 A8MWL6 223 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 F5H697 171 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 SUPT4H1P63272 117 aaKnown RBP14.76□□□□□ -0.05
SCARB2-223ENST00000640640 OR51G1Q8NGK1 321 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 SPSB4Q96A44 273 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 MRPL37Q9BZE1 423 aaKnown RBP14.76□□□□□ -0.05
SCARB2-223ENST00000640640 MDS2Q8NDY4 140 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 CARHSP1Q9Y2V2 147 aaKnown RBP14.76□□□□□ -0.05
SCARB2-223ENST00000640640 UFC1Q9Y3C8 167 aa14.76□□□□□ -0.05
SCARB2-223ENST00000640640 TFF1P04155 84 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 EGR1P18146 543 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 NUBP1P53384 320 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 ID3Q02535 119 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 PCSK4Q6UW60 755 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 CRYBB3P26998 211 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 ZCCHC24Q8N2G6 241 aaKnown RBP14.75□□□□□ -0.05
SCARB2-223ENST00000640640 C19orf24Q9BVV8 132 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 KIR2DL2P43627 348 aaPredicted RBP14.75□□□□□ -0.05
SCARB2-223ENST00000640640 MEF2CQ06413 473 aaPredicted RBP14.75□□□□□ -0.05
SCARB2-223ENST00000640640 WDFY1Q8IWB7 410 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 WISP1O95388 367 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 ZNF137PP52743 207 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 UNQ5815/PRO19632Q6UWF5 114 aa14.75□□□□□ -0.05
SCARB2-223ENST00000640640 DOCK10Q96BY6 2186 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 F8VVB4 439 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 F8VWA3 439 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 GBGT1Q8N5D6 347 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 LINC00312Q9Y6C7 94 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 LRRK1Q38SD2 2015 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 TRAV34A0A0B4J273 112 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 J3KRW8 73 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 APCSP02743 223 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 AGAP20933 346 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 ELOBQ15370 118 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 ZNF525Q8N782 197 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 LRTM2Q8N967 370 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 WDR31Q8NA23 367 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 HIST1H2BAQ96A08 127 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 ZNF524Q96C55 264 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 TGIF2-C20orf24A0A0A6YYL0 155 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 YPEL1O60688 119 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 QRFPP83859 136 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 TMEM42Q69YG0 159 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 EIF4E3Q8N5X7 224 aaKnown RBP14.74□□□□□ -0.05
SCARB2-223ENST00000640640 YPEL2Q96QA6 119 aa14.74□□□□□ -0.05
SCARB2-223ENST00000640640 ETV2O00321 342 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-223ENST00000640640 RPL30P62888 115 aaKnown RBP14.73□□□□□ -0.05
SCARB2-223ENST00000640640 SMUG1Q53HV7 270 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 RRHO14718 337 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 MT-ND6P03923 174 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 GGACTQ9BVM4 153 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 OR51M1Q9H341 326 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 GOLT1BQ9Y3E0 138 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 LY6G6EA0A0G2JKS1 128 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 CCL3L1P16619 93 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 GCHFRP30047 84 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 MFAP4P55083 255 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 ZNF324BQ6AW86 544 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-223ENST00000640640 ATRAIDQ6UW56 229 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 PLSCR4Q9NRQ2 329 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 U3KQA8 63 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 PPOXP50336 477 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 TFF3Q07654 80 aa14.73□□□□□ -0.05
SCARB2-223ENST00000640640 PEAR1Q5VY43 1037 aaPredicted RBP14.73□□□□□ -0.05
SCARB2-223ENST00000640640 MUC6Q6W4X9 2439 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 IL6RP08887 468 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-223ENST00000640640 FCGR2BP31994 310 aaPredicted RBP14.72□□□□□ -0.05
SCARB2-223ENST00000640640 ZNF343Q6P1L6 599 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 VAMP3Q15836 100 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 MORN2Q502X0 79 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 RTN4RL2Q86UN3 420 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 RABAC1Q9UI14 185 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 TRBV23-1A0A0A0MS06 115 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 FOXL2NBQ6ZUU3 175 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 A0A087X0M5 115 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 A0A1B0GX30 115 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 C19orf67A6NJJ6 358 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 PTTG1IPP53801 180 aa14.72□□□□□ -0.05
SCARB2-223ENST00000640640 NAPSAO96009 420 aa14.71□□□□□ -0.05
SCARB2-223ENST00000640640 FXYD3Q14802 87 aa14.71□□□□□ -0.05
SCARB2-223ENST00000640640 TMEM208Q9BTX3 173 aa14.71□□□□□ -0.05
SCARB2-223ENST00000640640 RAMP3O60896 148 aa14.71□□□□□ -0.05
SCARB2-223ENST00000640640 SRP19P09132 144 aaKnown RBP14.71□□□□□ -0.05
SCARB2-223ENST00000640640 IFI27L2Q9H2X8 130 aa14.71□□□□□ -0.05
SCARB2-223ENST00000640640 DPM3Q9P2X0 92 aa14.71□□□□□ -0.05
SCARB2-223ENST00000640640 TEX50A0A1B0GTY4 177 aa14.71□□□□□ -0.06
SCARB2-223ENST00000640640 ZCCHC14Q8WYQ9 949 aaKnown RBP14.71□□□□□ -0.06
SCARB2-223ENST00000640640 TMEM191AQ9H0A3 160 aa14.71□□□□□ -0.06
SCARB2-223ENST00000640640 OR2T8A6NH00 312 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 LOXL3P58215 753 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 MRPL20Q9BYC9 149 aaKnown RBP14.7□□□□□ -0.06
SCARB2-223ENST00000640640 SRRM5B3KS81 715 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 PSPNO60542 156 aa14.7□□□□□ -0.06
SCARB2-223ENST00000640640 MOSP00540 346 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms