RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SNRNP40Q96DI7 357 aaKnown RBP12.07□□□□□ -0.48
SCARB2-221ENST00000640341 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 WT1P19544 449 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-221ENST00000640341 TRIP6Q15654 476 aaKnown RBP12.06□□□□□ -0.48
SCARB2-221ENST00000640341 HLA-DRB5Q30154 266 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 RPRMLQ8N4K4 120 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 ITLN1Q8WWA0 313 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 CBLN4Q9NTU7 201 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 NBASA2RRP1 2371 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 IGHV3-48P01763 117 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 OR10J4P0C629 311 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 FRMD6-AS1P0C7T7 363 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 IGFBP2P18065 325 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 TCL1AP56279 114 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 RAB4BP61018 213 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 CISD2Q8N5K1 135 aaKnown RBP12.06□□□□□ -0.48
SCARB2-221ENST00000640341 STPG3Q8N7X2 389 aa12.06□□□□□ -0.48
SCARB2-221ENST00000640341 GGCTO75223 188 aaKnown RBP12.05□□□□□ -0.48
SCARB2-221ENST00000640341 CGAP01215 116 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 IL6RP08887 468 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-221ENST00000640341 SRP14P37108 136 aaKnown RBP12.05□□□□□ -0.48
SCARB2-221ENST00000640341 MLANAQ16655 118 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 CALYQ9NYX4 217 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 SPTA1P02549 2419 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 VENTXO95231 258 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 NPY1RP25929 384 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 RELBQ01201 579 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 OR10G8Q8NGN5 311 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 PPP1R35Q8TAP8 253 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 ACY3Q96HD9 319 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 MS4A10Q96PG2 267 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 OR7C2O60412 319 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 CA2P00918 260 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 ADMP35318 185 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 ERVFC1-1P60608 527 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 SSX2Q16385 188 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 ARSJQ5FYB0 599 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-221ENST00000640341 BHLHA15Q7RTS1 189 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-221ENST00000640341 DEFB124Q8NES8 71 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 SARAFQ96BY9 339 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 IFI27L2Q9H2X8 130 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 KCNIP2Q9NS61 270 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 RYDENQ9NUL5 291 aaKnown RBP12.05□□□□□ -0.48
SCARB2-221ENST00000640341 FKBP11Q9NYL4 201 aa12.05□□□□□ -0.48
SCARB2-221ENST00000640341 SAA2-SAA4A0A096LPE2 208 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 MGST3O14880 152 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 SAA2P0DJI9 122 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-221ENST00000640341 PSG5Q15238 335 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 ZCCHC24Q8N2G6 241 aaKnown RBP12.04□□□□□ -0.48
SCARB2-221ENST00000640341 SLC24A4Q8NFF2 622 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 OR5R1Q8NH85 324 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 FAM103A1Q9BTL3 118 aaKnown RBP12.04□□□□□ -0.48
SCARB2-221ENST00000640341 NPVFQ9HCQ7 196 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 KALRNO60229 2985 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 M0R296 226 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 CXorf1O96002 111 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 TIMP3P35625 211 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 IER3P46695 156 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 FXYD3Q14802 87 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 EFNB3Q15768 340 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 OR4A47Q6IF82 309 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 TEPPQ6URK8 271 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 MIR17HGQ75NE6 70 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 CCL13Q99616 98 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 REG1BP48304 166 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 VWC2Q2TAL6 325 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 DOLPP1Q86YN1 238 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 TGIF2LXQ8IUE1 241 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 PRR7Q8TB68 274 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 SERTAD4Q9NUC0 356 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 DCAF16Q9NXF7 216 aa12.04□□□□□ -0.48
SCARB2-221ENST00000640341 PLXNB1O43157 2135 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 A8MWP6 167 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 AHRRA9YTQ3 701 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 GCHFRP30047 84 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 MRPS11P82912 194 aaKnown RBP12.03□□□□□ -0.48
SCARB2-221ENST00000640341 HTD2P86397 168 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 KIAA1644Q3SXP7 199 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 CT45A1Q5HYN5 189 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 CT45A3Q8NHU0 189 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 OTOGLQ3ZCN5 2332 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 TET2Q6N021 2002 aaPredicted RBP12.03□□□□□ -0.48
SCARB2-221ENST00000640341 STAG3L2P0CL84 134 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 STAG3L3P0CL85 134 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 OPRK1P41145 380 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 TEX38Q6PEX7 206 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 OR4S2Q8NH73 311 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 JPT1Q9UK76 154 aa12.03□□□□□ -0.48
SCARB2-221ENST00000640341 SRRM5B3KS81 715 aa12.02□□□□□ -0.48
SCARB2-221ENST00000640341 FCN1O00602 326 aa12.02□□□□□ -0.48
SCARB2-221ENST00000640341 MGST1P10620 155 aaKnown RBP12.02□□□□□ -0.48
SCARB2-221ENST00000640341 CRYBB3P26998 211 aa12.02□□□□□ -0.48
SCARB2-221ENST00000640341 G0S2P27469 103 aa12.02□□□□□ -0.48
SCARB2-221ENST00000640341 VDAC2P45880 294 aaPredicted RBP12.02□□□□□ -0.48
SCARB2-221ENST00000640341 RPL29P47914 159 aaKnown RBP12.02□□□□□ -0.48
SCARB2-221ENST00000640341 PRR31Q5SQ13 230 aa12.02□□□□□ -0.48
SCARB2-221ENST00000640341 TOMM20LQ6UXN7 152 aa12.02□□□□□ -0.48
SCARB2-221ENST00000640341 BAGE3Q86Y29 109 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms