RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 CCL1P22362 96 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 GPR6P46095 362 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-218ENST00000639715 PLAURQ03405 335 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 PCOLCEQ15113 449 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 BVES-AS1Q5T3Y7 98 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 CCDC144NLQ6NUI1 221 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 TRAT1Q6PIZ9 186 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 PRSS57Q6UWY2 283 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 GAPTQ8N292 157 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 TEX29Q8N6K0 151 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 SLC25A40Q8TBP6 338 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 CT55Q8WUE5 264 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 CACNG8Q8WXS5 425 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 HDHD3Q9BSH5 251 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-218ENST00000639715 LINC00470Q9BZP3 86 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 SLC7A10Q9NS82 523 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 OR2W1Q9Y3N9 320 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 J3QT63 122 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 SYNGR2O43760 224 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 NGFP01138 241 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 CLPSP04118 112 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 TYMSP04818 313 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 F2RP25116 425 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 GPR12P47775 334 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 GNG4P50150 75 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 FGF12P61328 243 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 MEF2CQ06413 473 aaPredicted RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 ADAMTSL5Q6ZMM2 481 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 STPG3Q8N7X2 389 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 ZBTB34Q8NCN2 500 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM222Q9H0R3 208 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 MBNL3Q9NUK0 354 aaKnown RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 CACNG5Q9UF02 275 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 DUSP13Q9UII6 198 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 PLXND1Q9Y4D7 1925 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 LEPROTL1O95214 131 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 CELA3AP09093 270 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 CA6P23280 308 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 GCSHP23434 173 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM50BP56557 158 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 MMD2Q8IY49 270 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 FADS6Q8N9I5 356 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 HARBI1Q96MB7 349 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 SPTBN2O15020 2390 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 HELZP42694 1942 aaKnown RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 C1QTNF9BB2RNN3 333 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 SLC38A11Q08AI6 406 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 FOXL1Q12952 345 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 PRDM14Q9GZV8 571 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 YTHDF2Q9Y5A9 579 aaKnown RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 CHCHD2Q9Y6H1 151 aaPredicted RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 LOC101059948A0A1B0GTJ6 334 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 hDV102S1A0JD36 115 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 PGPEP1LA6NFU8 196 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 SIVA1O15304 175 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 HLA-DQA1P01909 254 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 SMIM13P0DJ93 91 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 SLC25A6P12236 298 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 BCL3P20749 454 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 MEOX1P50221 254 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 RPS16P62249 146 aaKnown RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 EDDM3AQ14507 147 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM187Q14656 261 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 MED12Q93074 2177 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 TRIB1Q96RU8 372 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 SH2D2AQ9NP31 389 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 CCL28Q9NRJ3 127 aa4.81□□□□□ -1.64
SCARB2-218ENST00000639715 MRPL27Q9P0M9 148 aaKnown RBP4.81□□□□□ -1.64
SCARB2-218ENST00000639715 TRAV1-1A0A0B4J248 108 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 MT-CO3P00414 261 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 HLA-DRB1P01911 266 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 OR5AL1P0C617 328 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 COX6A1P12074 109 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 IGFBP2P18065 325 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 CCL11P51671 97 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 EDDM3BP56851 147 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 ANXA2RQ3ZCQ2 193 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 TM4SF20Q53R12 229 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 C1orf210Q8IVY1 113 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 ZADH2Q8N4Q0 377 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 NPVFQ9HCQ7 196 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 IL36GQ9NZH8 169 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 CRIM1Q9NZV1 1036 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 COL4A6Q14031 1691 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 CEP350Q5VT06 3117 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 TRBV9A0A0B4J1U6 114 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 H0Y980 276 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 K7EP34 96 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 NRN1LQ496H8 165 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 SPINK14Q6IE38 97 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 SPXQ9BT56 116 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 ARRDC1-AS1Q9H2J1 176 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 PROCRQ9UNN8 238 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 ATP23Q9Y6H3 246 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 TRAV17A0A0B4J275 112 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 TIAF1O95411 115 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 G6PCP35575 357 aa4.8□□□□□ -1.64
SCARB2-218ENST00000639715 PSG3Q16557 428 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms