RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 MARCH11A6NNE9 402 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 CENPXA8MT69 81 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 ARPC1BO15143 372 aaKnown RBP12.75□□□□□ -0.37
COLCA2-206ENST00000638573 B3GALNT1O75752 331 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 MAS1LP35410 378 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 CDX1P47902 265 aaPredicted RBP12.75□□□□□ -0.37
COLCA2-206ENST00000638573 POU2AF1Q16633 256 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 AKIRIN2Q53H80 203 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 LFNGQ8NES3 379 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 SRSF12Q8WXF0 261 aaKnown RBP12.75□□□□□ -0.37
COLCA2-206ENST00000638573 MRGPRFQ96AM1 343 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 AKIP1Q9NQ31 210 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 TMEM140Q9NV12 185 aa12.75□□□□□ -0.37
COLCA2-206ENST00000638573 FOXA2Q9Y261 457 aaPredicted RBP12.75□□□□□ -0.37
COLCA2-206ENST00000638573 C3orf85A0A1B0GTC6 90 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 NAP1L6A6NFF2 107 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 ATG12O94817 140 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 KRASP01116 189 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 EGR2P11161 476 aaPredicted RBP12.74□□□□□ -0.37
COLCA2-206ENST00000638573 IL7P13232 177 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 RPA2P15927 270 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 RPL8P62917 257 aaKnown RBP12.74□□□□□ -0.37
COLCA2-206ENST00000638573 TRIM16LQ309B1 348 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 ZNF585BQ52M93 769 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 MYOZ3Q8TDC0 251 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 PRR25Q96S07 402 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 SPIN2AQ99865 258 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 SPIN2BQ9BPZ2 258 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 CCDC32Q9BV29 185 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 WDR12Q9GZL7 423 aaKnown RBP12.74□□□□□ -0.37
COLCA2-206ENST00000638573 C5orf66Q9H5L9 145 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 GPR132Q9UNW8 380 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 NUBP2Q9Y5Y2 271 aa12.74□□□□□ -0.37
COLCA2-206ENST00000638573 DUS4LO95620 317 aaKnown RBP12.73□□□□□ -0.37
COLCA2-206ENST00000638573 HLA-GP17693 338 aa12.73□□□□□ -0.37
COLCA2-206ENST00000638573 G6PCP35575 357 aa12.73□□□□□ -0.37
COLCA2-206ENST00000638573 C19orf54Q5BKX5 351 aa12.73□□□□□ -0.37
COLCA2-206ENST00000638573 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
COLCA2-206ENST00000638573 MINDY2Q8NBR6 621 aa12.73□□□□□ -0.37
COLCA2-206ENST00000638573 C4orf3Q8WVX3 66 aa12.73□□□□□ -0.37
COLCA2-206ENST00000638573 SDHCQ99643 169 aaPredicted RBP12.73□□□□□ -0.37
COLCA2-206ENST00000638573 SLC25A21Q9BQT8 299 aaPredicted RBP12.73□□□□□ -0.37
COLCA2-206ENST00000638573 C7orf50Q9BRJ6 194 aaKnown RBP12.73□□□□□ -0.37
COLCA2-206ENST00000638573 NAA60Q9H7X0 242 aa12.73□□□□□ -0.37
COLCA2-206ENST00000638573 LINC00854A0A1B0GVQ3 168 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 MSGN1A6NI15 193 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 UPK2O00526 184 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 SNAPC5O75971 98 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 IGLV1-40P01703 118 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 RPL27AP46776 148 aaKnown RBP12.72□□□□□ -0.37
COLCA2-206ENST00000638573 SSBP2P81877 361 aaPredicted RBP12.72□□□□□ -0.37
COLCA2-206ENST00000638573 MRGPRG-AS1Q2M3A8 158 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 ZNF491Q8N8L2 437 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 OR11H1Q8NG94 326 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 TP53RKQ96S44 253 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 TSC22D3Q99576 134 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 RTBDNQ9BSG5 229 aaPredicted RBP12.72□□□□□ -0.37
COLCA2-206ENST00000638573 COMMD5Q9GZQ3 224 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 ZNF355PQ9NSJ1 428 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 VSIG4Q9Y279 399 aa12.72□□□□□ -0.37
COLCA2-206ENST00000638573 CRYM-AS1A6NIL9 109 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 I3L521 148 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 FGF2P09038 288 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 SLC6A1P30531 599 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 AKR1C2P52895 323 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 FHL3Q13643 280 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 ZNF846Q147U1 533 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 RBMS2Q15434 407 aaKnown RBP12.71□□□□□ -0.37
COLCA2-206ENST00000638573 C10orf55Q5SWW7 151 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 H2BFWTQ7Z2G1 175 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 TMED4Q7Z7H5 227 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 RNASE11Q8TAA1 199 aaKnown RBP12.71□□□□□ -0.37
COLCA2-206ENST00000638573 FYTTD1Q96QD9 318 aaKnown RBP12.71□□□□□ -0.37
COLCA2-206ENST00000638573 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.37
COLCA2-206ENST00000638573 SEC14L6B5MCN3 397 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 H3BUA1 57 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 OR5AC1P0C628 307 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 APELAP0DMC3 54 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 ANXA3P12429 323 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 AKR1C4P17516 323 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 UCP1P25874 307 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 DEFA5Q01523 94 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 DHODHQ02127 395 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 SP6Q3SY56 376 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 SLC25A42Q86VD7 318 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 CADM3Q8N126 398 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 DPF1Q92782 380 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 SLA2Q9H6Q3 261 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 COA4Q9NYJ1 87 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 PRNDQ9UKY0 176 aa12.7□□□□□ -0.38
COLCA2-206ENST00000638573 RBMXL2O75526 392 aaKnown RBP12.69□□□□□ -0.38
COLCA2-206ENST00000638573 IGHV3-11P01762 117 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 RAB9AP51151 201 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 SLURP1P55000 103 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 TPPP2P59282 170 aa12.69□□□□□ -0.38
COLCA2-206ENST00000638573 THOC7Q6I9Y2 204 aaKnown RBP12.69□□□□□ -0.38
COLCA2-206ENST00000638573 ADAD2Q8NCV1 583 aaKnown RBP12.69□□□□□ -0.38
COLCA2-206ENST00000638573 OR5T1Q8NG75 326 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms