RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 RPP21Q9H633 154 aaKnown RBP13.03□□□□□ -0.32
UBE3A-227ENST00000638011 NHP2Q9NX24 153 aaKnown RBP13.03□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BKO60814 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BJP06899 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BOP23527 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BBP33778 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BDP58876 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BCP62807 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST2H2BEQ16778 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BHQ93079 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BNQ99877 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 HIST1H2BMQ99879 126 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 SOSTQ9BQB4 213 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 EDA2RQ9HAV5 297 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 ALKBH6Q3KRA9 238 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.02□□□□□ -0.32
UBE3A-227ENST00000638011 SHISA5Q8N114 240 aa13.02□□□□□ -0.32
UBE3A-227ENST00000638011 RCC1LQ96I51 464 aaKnown RBP13.02□□□□□ -0.32
UBE3A-227ENST00000638011 RLN3Q8WXF3 142 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 PLPPR2Q96GM1 343 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 ADAMTSL3P82987 1691 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 PEX7O00628 323 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 CDIPTO14735 213 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 VSTM2LQ96N03 204 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 GMLQ99445 158 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 KLF12Q9Y4X4 402 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 IFI27P40305 119 aaPredicted RBP13.02□□□□□ -0.33
UBE3A-227ENST00000638011 OR52M1Q8NGK5 317 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 CD3EP07766 207 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 CRYBB3P26998 211 aa13.02□□□□□ -0.33
UBE3A-227ENST00000638011 M0R2P5 195 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 CEACAM4O75871 244 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 INAFM2P0DMQ5 153 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 P2RY4P51582 365 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 HSPE1P61604 102 aaKnown RBP13.01□□□□□ -0.33
UBE3A-227ENST00000638011 MGST3O14880 152 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 ZNF793Q6ZN11 406 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 FOXC2Q99958 501 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 RTN4RQ9BZR6 473 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 STARD6P59095 220 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 SRSF1Q07955 248 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBE3A-227ENST00000638011 FAM106AQ4KMX7 169 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 TDHQ8IZJ6 230 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 C8orf44Q96CB5 159 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 KLK15Q9H2R5 256 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 FGFRL1Q8N441 504 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 FAM181AQ8N9Y4 354 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 CACNG8Q8WXS5 425 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 IFITM2Q01629 132 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 SP9P0CG40 484 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 FAM27BQ5VT28 67 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 DRAM1Q8N682 238 aa13.01□□□□□ -0.33
UBE3A-227ENST00000638011 OR9G9P0C7N8 305 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 SSTR5P35346 364 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 C1orf100Q5SVJ3 147 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 PIMREGQ9BSJ6 248 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 HS3ST3B1Q9Y662 390 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 TRBV5-5A0A0J9YX44 114 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 NPIPB13A6NJU9 1138 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 FAM157AC9JC47 383 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 TNFSF14O43557 240 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 GCHFRP30047 84 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 YBX2Q9Y2T7 364 aaKnown RBP13□□□□□ -0.33
UBE3A-227ENST00000638011 TRBV20-1A0A075B6N2 111 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 NXPH1P58417 271 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 SMAD4Q13485 552 aaKnown RBP13□□□□□ -0.33
UBE3A-227ENST00000638011 FXYD3Q14802 87 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 GOLT1AQ6ZVE7 132 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 NPCDR1Q9BY65 106 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 LOXL3P58215 753 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 MIC13Q5XKP0 118 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 ERG28Q9UKR5 140 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 ECSCRQ19T08 205 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 COQ2Q96H96 371 aa13□□□□□ -0.33
UBE3A-227ENST00000638011 FBXO46Q6PJ61 603 aaPredicted RBP12.99□□□□□ -0.33
UBE3A-227ENST00000638011 SPINK8P0C7L1 97 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 TNFRSF6BO95407 300 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 PEX11BO96011 259 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 MDKP21741 143 aaPredicted RBP12.99□□□□□ -0.33
UBE3A-227ENST00000638011 SDF2L1Q9HCN8 221 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 OR4D11Q8NGI4 311 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 F2Z2F3 143 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 CEACAM5P06731 702 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 UMODP07911 640 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 Q6ZNB5 142 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 RPRMQ9NS64 109 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 TRAV5A0A0B4J249 113 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 C1orf194Q5T5A4 169 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 NAPSAO96009 420 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 PRR13Q9NZ81 148 aa12.99□□□□□ -0.33
UBE3A-227ENST00000638011 EFNB2P52799 333 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 SOX8P57073 446 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 DTX1Q86Y01 620 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 HIST1H2BLQ99880 126 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 ASCL2Q99929 193 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 CXCL16Q9H2A7 254 aa12.98□□□□□ -0.33
UBE3A-227ENST00000638011 HMGA1P17096 107 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms