RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 TMEM50AO95807 157 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 PAX6P26367 422 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 CNTFRP26992 372 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 DYNLT3P51808 116 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 AP2S1P53680 142 aaPredicted RBP9.43□□□□□ -0.9
CLN6-223ENST00000637823 HES1Q14469 280 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 HNF4GQ14541 408 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 OPCMLQ14982 345 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 BRD3OSQ6XYD6 125 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 MMD2Q8IY49 270 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 CIARTQ8N365 385 aaPredicted RBP9.43□□□□□ -0.9
CLN6-223ENST00000637823 OR2C3Q8N628 320 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 Q8N6K4 173 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 OR5B3Q8NH48 314 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 NANPQ8TBE9 248 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 DTD1Q8TEA8 209 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 CLCC1Q96S66 551 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 ARL6Q9H0F7 186 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 ZC4H2Q9NQZ6 224 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 LYRM2Q9NU23 88 aaPredicted RBP9.43□□□□□ -0.9
CLN6-223ENST00000637823 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 METTL1Q9UBP6 276 aaKnown RBP9.43□□□□□ -0.9
CLN6-223ENST00000637823 TCF19Q9Y242 345 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 SIGLEC9Q9Y336 463 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 CREBBPQ92793 2442 aa9.43□□□□□ -0.9
CLN6-223ENST00000637823 A0A0U1RQK1 487 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 FAM24AA6NFZ4 105 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 MSGN1A6NI15 193 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 RRHO14718 337 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 NBR2O15453 112 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 TSC22D2O75157 780 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 NDUFA3O95167 84 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 FSHBP01225 129 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 FBP1P09467 338 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 IAPPP10997 89 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 TMEM11P17152 192 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 CD24P25063 80 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 F2RL1P55085 397 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 PRSS8Q16651 343 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 FAM120AOSQ5T036 256 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 PPP1R27Q86WC6 154 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 TEX29Q8N6K0 151 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 OR1L8Q8NGR8 309 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 COMMD5Q9GZQ3 224 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 HIPK2Q9H2X6 1198 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 ZNF430Q9H8G1 570 aaPredicted RBP9.42□□□□□ -0.9
CLN6-223ENST00000637823 KIAA1456Q9P272 454 aa9.42□□□□□ -0.9
CLN6-223ENST00000637823 CSMD2Q7Z408 3487 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 KANTRA0A1W2PQU2 76 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 TAAR5O14804 337 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 VDAC2P45880 294 aaPredicted RBP9.41□□□□□ -0.9
CLN6-223ENST00000637823 CAV2P51636 162 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 RPP30P78346 268 aaKnown RBP9.41□□□□□ -0.9
CLN6-223ENST00000637823 PRCDQ00LT1 54 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 MMDQ15546 238 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 AANATQ16613 207 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 MRGPRG-AS1Q2M3A8 158 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 OR8H1Q8NGG4 311 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 ARPC5LQ9BPX5 153 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 GON7Q9BXV9 100 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 FBXL15Q9H469 300 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 ENY2Q9NPA8 101 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 HEYLQ9NQ87 328 aaPredicted RBP9.41□□□□□ -0.9
CLN6-223ENST00000637823 NDUFA4L2Q9NRX3 87 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 C1RLQ9NZP8 487 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 ITGB1BP2Q9UKP3 347 aa9.41□□□□□ -0.9
CLN6-223ENST00000637823 IGSF23A1L1A6 192 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 BCL2L11O43521 198 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 MYOD1P15172 320 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 HOXA1P49639 335 aaPredicted RBP9.4□□□□□ -0.9
CLN6-223ENST00000637823 EWSR1Q01844 656 aaKnown RBP eCLIP9.4□□□□□ -0.97e-6■■□□□ 12.2
CLN6-223ENST00000637823 NHLH2Q02577 135 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 BAXQ07812 192 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 PJVKQ0ZLH3 352 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 PLGLAQ15195 96 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 C5orf64Q2M2E5 130 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 SPINK9Q5DT21 86 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 SPANXN5Q5MJ07 72 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 C9orf139Q6ZV77 190 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 LURAP1LQ8IV03 231 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 ZDHHC16Q969W1 377 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 HINT2Q9BX68 163 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 SLA2Q9H6Q3 261 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.9
CLN6-223ENST00000637823 STRAPQ9Y3F4 350 aaKnown RBP9.4□□□□□ -0.9
CLN6-223ENST00000637823 FLNAP21333 2647 aaKnown RBP9.4□□□□□ -0.9
CLN6-223ENST00000637823 A0A1W2PN81 502 aa9.39□□□□□ -0.91
CLN6-223ENST00000637823 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
CLN6-223ENST00000637823 INS-IGF2F8WCM5 200 aa9.39□□□□□ -0.91
CLN6-223ENST00000637823 CD5LO43866 347 aa9.39□□□□□ -0.91
CLN6-223ENST00000637823 ACTL6BO94805 426 aa9.39□□□□□ -0.91
CLN6-223ENST00000637823 SCAF4O95104 1147 aaKnown RBP9.39□□□□□ -0.91
CLN6-223ENST00000637823 CHRNA7P36544 502 aa9.39□□□□□ -0.91
CLN6-223ENST00000637823 COMPP49747 757 aaPredicted RBP9.39□□□□□ -0.91
CLN6-223ENST00000637823 SULT1A1P50225 295 aa9.39□□□□□ -0.91
CLN6-223ENST00000637823 ATP5IP56385 69 aaPredicted RBP9.39□□□□□ -0.91
CLN6-223ENST00000637823 LRRC75BQ2VPJ9 315 aa9.39□□□□□ -0.91
CLN6-223ENST00000637823 TMEM14EPQ6UXP3 125 aa9.39□□□□□ -0.91
CLN6-223ENST00000637823 SLC51BQ86UW2 128 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms