RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 UFC1Q9Y3C8 167 aa13.4□□□□□ -0.26
CLN5-218ENST00000637397 TRAV24A0A0B4J272 114 aa13.4□□□□□ -0.27
CLN5-218ENST00000637397 DLL1O00548 723 aa13.4□□□□□ -0.27
CLN5-218ENST00000637397 NAPSAO96009 420 aa13.4□□□□□ -0.27
CLN5-218ENST00000637397 GATAD1Q8WUU5 269 aa13.4□□□□□ -0.27
CLN5-218ENST00000637397 ZCCHC14Q8WYQ9 949 aaKnown RBP13.4□□□□□ -0.27
CLN5-218ENST00000637397 PGLYRP4Q96LB8 373 aa13.4□□□□□ -0.27
CLN5-218ENST00000637397 ZNF430Q9H8G1 570 aaPredicted RBP13.4□□□□□ -0.27
CLN5-218ENST00000637397 TRPM7Q96QT4 1865 aa13.4□□□□□ -0.27
CLN5-218ENST00000637397 FNDC1Q4ZHG4 1894 aaPredicted RBP13.39□□□□□ -0.27
CLN5-218ENST00000637397 NRN1LQ496H8 165 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 TMEM171Q8WVE6 324 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 TMEM170AQ8WVE7 144 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 TNFRSF19Q9NS68 423 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 DOCK9Q9BZ29 2069 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 ZNF716A6NP11 495 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 MAS1LP35410 378 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 CEACAM3P40198 252 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 MMDQ15546 238 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 C1orf174Q8IYL3 243 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 IL36BQ9NZH7 164 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 SLC25A17O43808 307 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 RAMP3O60896 148 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 PSG7Q13046 419 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 JOSD1Q15040 202 aaPredicted RBP13.39□□□□□ -0.27
CLN5-218ENST00000637397 CLEC5AQ9NY25 188 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 FER1L5A0AVI2 2057 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 DPRXA6NFQ7 191 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 PRR33A8MZF0 331 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 OR4A47Q6IF82 309 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 PCSK4Q6UW60 755 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 CLDN16Q9Y5I7 305 aa13.39□□□□□ -0.27
CLN5-218ENST00000637397 RIF1Q5UIP0 2472 aaKnown RBP13.38□□□□□ -0.27
CLN5-218ENST00000637397 SPAARA0A1B0GVQ0 90 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 FAM90A27PA6NNH2 459 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 TMEM177Q53S58 311 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 ACP7Q6ZNF0 438 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 NPIPB3Q92617 1050 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 TRBV9A0A0B4J1U6 114 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 WISP1O95388 367 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 SMIM17P0DL12 118 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 C1QL4Q86Z23 238 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 TBL2Q9Y4P3 447 aaKnown RBP13.38□□□□□ -0.27
CLN5-218ENST00000637397 IGFBP2P18065 325 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 LYL1P12980 280 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 TMEM116Q8NCL8 245 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 MBD3L1Q8WWY6 194 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 IDI2-AS1Q9NZ38 188 aa13.38□□□□□ -0.27
CLN5-218ENST00000637397 DOCK8Q8NF50 2099 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 TRBV24-1A0A075B6N3 115 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 A6NDN8 102 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 CFPP27918 469 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 FOXA3P55318 350 aaPredicted RBP13.37□□□□□ -0.27
CLN5-218ENST00000637397 ZNF524Q96C55 264 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 J3QW42 95 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 REG1AP05451 166 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 CELA3BP08861 270 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 SNRNP40Q96DI7 357 aaKnown RBP13.37□□□□□ -0.27
CLN5-218ENST00000637397 SFXN3Q9BWM7 321 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 C16orf97H3BN30 126 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 HGFACQ04756 655 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 ZNF324BQ6AW86 544 aaPredicted RBP13.37□□□□□ -0.27
CLN5-218ENST00000637397 MUC15Q8N387 334 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 OR8B3Q8NGG8 313 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 C14orf144Q96I85 54 aa13.37□□□□□ -0.27
CLN5-218ENST00000637397 LOC102723996A0A087X1L8 192 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 NDUFA2O43678 99 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 SERF1AO75920 110 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 OR4A8P0C604 315 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 NMUP48645 174 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 ZNF146Q15072 292 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 M0R296 226 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 CD3EP07766 207 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 UQCRFS1P47985 274 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 FOXG1P55316 489 aaPredicted RBP13.36□□□□□ -0.27
CLN5-218ENST00000637397 CSRP2Q16527 193 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 OR5R1Q8NH85 324 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 FOXJ2Q9P0K8 574 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 LRRK1Q38SD2 2015 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 K7ERU9 68 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 GATA2P23769 480 aaPredicted RBP13.36□□□□□ -0.27
CLN5-218ENST00000637397 NMSQ5H8A3 153 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 GCSAMLQ5JQS6 135 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 OR8B2Q96RD0 313 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 DEPPQ9NTK1 212 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 WNK2Q9Y3S1 2297 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 AMBPP02760 352 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 FAM19A2Q8N3H0 131 aa13.36□□□□□ -0.27
CLN5-218ENST00000637397 HELZP42694 1942 aaKnown RBP13.36□□□□□ -0.27
CLN5-218ENST00000637397 PCP4P48539 62 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 Q6ZT83 130 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 GTF3AQ92664 365 aaKnown RBP13.35□□□□□ -0.27
CLN5-218ENST00000637397 NEU1Q99519 415 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 FBLL1A6NHQ2 334 aaKnown RBP13.35□□□□□ -0.27
CLN5-218ENST00000637397 IFNL4K9M1U5 179 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 DMRTA1Q5VZB9 504 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 TFF1P04155 84 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 SCGB1C2P0DMR2 95 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 FAM201AQ5SY85 155 aa13.35□□□□□ -0.27
CLN5-218ENST00000637397 SLC25A34Q6PIV7 304 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms