RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 PHB2Q99623 299 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 TMEM222Q9H0R3 208 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 PRR13Q9NZ81 148 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 FLVCR2Q9UPI3 526 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 NSG2Q9Y328 171 aa13.48□□□□□ -0.25
CLN6-218ENST00000637223 A0A1W2PN81 502 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 TCRBV4S1A1TA0A5B7 111 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 MSGN1A6NI15 193 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 INMT-MINDY4F8WBC2 141 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 IL6RP08887 468 aaPredicted RBP13.47□□□□□ -0.25
CLN6-218ENST00000637223 OR9G9P0C7N8 305 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 PPIFP30405 207 aaKnown RBP13.47□□□□□ -0.25
CLN6-218ENST00000637223 CHRNA7P36544 502 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 SUPT4H1P63272 117 aaKnown RBP13.47□□□□□ -0.25
CLN6-218ENST00000637223 TMEM267Q0VDI3 215 aaPredicted RBP13.47□□□□□ -0.25
CLN6-218ENST00000637223 C19orf54Q5BKX5 351 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 KHDC1LQ5JSQ8 128 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 TEX38Q6PEX7 206 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 GLYATL2Q8WU03 294 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 ALX4Q9H161 411 aaPredicted RBP13.47□□□□□ -0.25
CLN6-218ENST00000637223 KCNIP3Q9Y2W7 256 aa13.47□□□□□ -0.25
CLN6-218ENST00000637223 A0A1B0GVG6 124 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 A0A1W2PRX2 142 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 IGKV1-5P01602 117 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 IGHG4P01861 327 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 MAS1LP35410 378 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 RPL27AP46776 148 aaKnown RBP13.46□□□□□ -0.25
CLN6-218ENST00000637223 AKR1C2P52895 323 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 OR2B8PP59922 312 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 CD83Q01151 205 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 DHODHQ02127 395 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 IZUMO4Q1ZYL8 232 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 AKIRIN2Q53H80 203 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 PRR31Q5SQ13 230 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 ASPHD1Q5U4P2 390 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 H2BFWTQ7Z2G1 175 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 COMMD1Q8N668 190 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 LHFPL5Q8TAF8 219 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 CASTOR1Q8WTX7 329 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 PPP1R14BQ96C90 147 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 GALNT14Q96FL9 552 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 FYTTD1Q96QD9 318 aaKnown RBP13.46□□□□□ -0.25
CLN6-218ENST00000637223 NUDT15Q9NV35 164 aa13.46□□□□□ -0.25
CLN6-218ENST00000637223 FOXA2Q9Y261 457 aaPredicted RBP13.46□□□□□ -0.25
CLN6-218ENST00000637223 E7EUB6 86 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 SOX15O60248 233 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 SNAPC5O75971 98 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 CDS2O95674 445 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 H2AFB2P0C5Z0 115 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 TRAPPC2P0DI81 140 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 TRAPPC2BP0DI82 140 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 VAMP1P23763 118 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 BCAP31P51572 246 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 FOXE3Q13461 319 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 TMEM187Q14656 261 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 NSUN5P1Q3KNT7 163 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 TMEM128Q5BJH2 165 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 TMEM268Q5VZI3 342 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 ZNF695Q8IW36 515 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 SELENOHQ8IZQ5 122 aaKnown RBP13.45□□□□□ -0.26
CLN6-218ENST00000637223 OR5T1Q8NG75 326 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 RNASE11Q8TAA1 199 aaKnown RBP13.45□□□□□ -0.26
CLN6-218ENST00000637223 C20orf85Q9H1P6 137 aa13.45□□□□□ -0.26
CLN6-218ENST00000637223 A0A1B0GW64 132 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 HMX3A6NHT5 357 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 TEX22C9J3V5 150 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 ATG12O94817 140 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 RPLP1P05386 114 aaKnown RBP13.44□□□□□ -0.26
CLN6-218ENST00000637223 ELANEP08246 267 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 PF4V1P10720 104 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 ANXA3P12429 323 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 PPP1R1AQ13522 171 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 CXorf66Q5JRM2 361 aaPredicted RBP13.44□□□□□ -0.26
CLN6-218ENST00000637223 SLC25A42Q86VD7 318 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 CADM3Q8N126 398 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 SPIN2AQ99865 258 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 SPIN2BQ9BPZ2 258 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 KLK15Q9H2R5 256 aa13.44□□□□□ -0.26
CLN6-218ENST00000637223 TSSC4Q9Y5U2 329 aaPredicted RBP13.44□□□□□ -0.26
CLN6-218ENST00000637223 A0A0G2JRQ6 117 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 C7orf66A4D0T2 115 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 CGB1A6NKQ9 187 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 DBX1A6NMT0 343 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 ADARB2-AS1A8MUL3 147 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 IGLV1-40P01703 118 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 IL5P05113 134 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 ANXA7P20073 488 aaKnown RBP13.43□□□□□ -0.26
CLN6-218ENST00000637223 PSMB8P28062 276 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 TMEM65Q6PI78 240 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 NDUFA11Q86Y39 141 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 OR4A16Q8NH70 328 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 RBPMSQ93062 196 aaKnown RBP13.43□□□□□ -0.26
CLN6-218ENST00000637223 RRNAD1Q96FB5 475 aaKnown RBP13.43□□□□□ -0.26
CLN6-218ENST00000637223 TMEM56Q96MV1 263 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 MS4A10Q96PG2 267 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 PRNDQ9UKY0 176 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 OR51B2Q9Y5P1 312 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 TMEM56-RWDD3S4R434 201 aa13.43□□□□□ -0.26
CLN6-218ENST00000637223 PKD1L1Q8TDX9 2849 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms