RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 ZNF48Q96MX3 618 aaPredicted RBP10.67□□□□□ -0.7
LINC00643-207ENST00000637212 RASL11BQ9BPW5 248 aa10.67□□□□□ -0.7
LINC00643-207ENST00000637212 QTRT1Q9BXR0 403 aaKnown RBP10.67□□□□□ -0.7
LINC00643-207ENST00000637212 COMMD5Q9GZQ3 224 aa10.67□□□□□ -0.7
LINC00643-207ENST00000637212 FBXL15Q9H469 300 aa10.67□□□□□ -0.7
LINC00643-207ENST00000637212 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
LINC00643-207ENST00000637212 NSG2Q9Y328 171 aa10.67□□□□□ -0.7
LINC00643-207ENST00000637212 TEX50A0A1B0GTY4 177 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 MDFIC2A0A1B0GVS7 189 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 ACTL6BO94805 426 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 MPC2O95563 127 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 IFNA17P01571 189 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 SLC25A4P12235 298 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 RAB32Q13637 225 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 PLGLAQ15195 96 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 FBLN7Q53RD9 439 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 SIGLECL1Q8N7X8 197 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 THAP6Q8TBB0 222 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 RAB40CQ96S21 281 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 SLC25A33Q9BSK2 321 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 RNF126Q9BV68 326 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 MOB4Q9Y3A3 225 aa10.66□□□□□ -0.7
LINC00643-207ENST00000637212 K7EPK0 472 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 FCN1O00602 326 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 SYNGR2O43760 224 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 CHST1O43916 411 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 IGHV4-59P01825 116 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 LYL1P12980 280 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 SRD5A1P18405 259 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 PVALBP20472 110 aaPredicted RBP10.65□□□□□ -0.7
LINC00643-207ENST00000637212 TAS2R30P59541 319 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 PJVKQ0ZLH3 352 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 C11orf87Q6NUJ2 197 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 PRSS54Q6PEW0 395 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 TMEM65Q6PI78 240 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 CIB3Q96Q77 187 aaPredicted RBP10.65□□□□□ -0.7
LINC00643-207ENST00000637212 SRSF8Q9BRL6 282 aaKnown RBP10.65□□□□□ -0.7
LINC00643-207ENST00000637212 GSX1Q9H4S2 264 aaPredicted RBP10.65□□□□□ -0.7
LINC00643-207ENST00000637212 NDUFA4L2Q9NRX3 87 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 CSPG4Q6UVK1 2322 aa10.65□□□□□ -0.7
LINC00643-207ENST00000637212 INS-IGF2F8WCM5 200 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 WRBO00258 174 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 GPR137BO60478 399 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 DEDDO75618 318 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 SCGB1D2O95969 90 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 HLA-DRB1P01911 266 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 C1QBP02746 253 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 COMPP49747 757 aaPredicted RBP10.64□□□□□ -0.71
LINC00643-207ENST00000637212 OR2B8PP59922 312 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 S100A10P60903 97 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 POLR2GP62487 172 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC00643-207ENST00000637212 CX3CL1P78423 397 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 PRCDQ00LT1 54 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 Q5BKY6 102 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 HSD17B13Q7Z5P4 300 aaPredicted RBP10.64□□□□□ -0.71
LINC00643-207ENST00000637212 MRPL41Q8IXM3 137 aaKnown RBP10.64□□□□□ -0.71
LINC00643-207ENST00000637212 SMIM8Q96KF7 97 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 CLCC1Q96S66 551 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 RBKSQ9H477 322 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 TPSG1Q9NRR2 321 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 VPREB3Q9UKI3 123 aa10.64□□□□□ -0.71
LINC00643-207ENST00000637212 LSM5Q9Y4Y9 91 aaKnown RBP10.64□□□□□ -0.71
LINC00643-207ENST00000637212 FLNAP21333 2647 aaKnown RBP10.64□□□□□ -0.71
LINC00643-207ENST00000637212 TRAV14DV4A0A0A6YYC5 116 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 A0A1W2PN81 502 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 CEBPZOSA8MTT3 80 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 E5RGE8 158 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 G3V3Q6 166 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 H0YIZ8 118 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 CLDN34H7C241 214 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 HOXA3O43365 443 aaPredicted RBP10.63□□□□□ -0.71
LINC00643-207ENST00000637212 CNIH1O95406 144 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 CHRNA7P36544 502 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 RPL27AP46776 148 aaKnown RBP10.63□□□□□ -0.71
LINC00643-207ENST00000637212 ATP5IP56385 69 aaPredicted RBP10.63□□□□□ -0.71
LINC00643-207ENST00000637212 FXYD3Q14802 87 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 TNXAQ16473 311 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 LY6EQ16553 131 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 LRRC37A5PQ49AS3 106 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 TMEM219Q86XT9 240 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 HYLS1Q96M11 299 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 MAGT1Q9H0U3 335 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 HIPK2Q9H2X6 1198 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 ENY2Q9NPA8 101 aa10.63□□□□□ -0.71
LINC00643-207ENST00000637212 ZNF469Q96JG9 3925 aaPredicted RBP10.63□□□□□ -0.71
LINC00643-207ENST00000637212 HMSDA8MTL9 139 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 L7N2F9 121 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 CA2P00918 260 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 AMY1AP04745 511 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 VDAC2P45880 294 aaPredicted RBP10.62□□□□□ -0.71
LINC00643-207ENST00000637212 P2RY1P47900 373 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 RPL23AP62750 156 aaKnown RBP10.62□□□□□ -0.71
LINC00643-207ENST00000637212 VAMP2P63027 116 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 RPP30P78346 268 aaKnown RBP10.62□□□□□ -0.71
LINC00643-207ENST00000637212 CD300CQ08708 224 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 ZFP69Q49AA0 526 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 NOXA1Q86UR1 476 aa10.62□□□□□ -0.71
LINC00643-207ENST00000637212 DTD1Q8TEA8 209 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms