RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 KIAA1644Q3SXP7 199 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 LOC390937A0A1W2PQ73 354 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 SMIM13P0DJ93 91 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 FGF5P12034 268 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 RFLNBQ8N5W9 214 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 FGFRL1Q8N441 504 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 C1orf162Q8NEQ5 155 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 KIR2DL4Q99706 377 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 SFXN3Q9BWM7 321 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 SRXN1Q9BYN0 137 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 A0A1W2PP11 408 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 INS-IGF2F8WCM5 200 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 CD160O95971 181 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 INSP01308 110 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 UNC119Q13432 240 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 PARLQ9H300 379 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 H1FOOQ8IZA3 346 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 COL6A6A6NMZ7 2263 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 ZNF562Q6V9R5 426 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 PKDREJQ9NTG1 2253 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 MUC4Q99102 2169 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 APOBEC3AP31941 199 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 PKIAP61925 76 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 OR51M1Q9H341 326 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 OR5AC2Q9NZP5 309 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 ZNF107Q9UII5 783 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 RNASE4P34096 147 aaKnown RBP13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 TNFSF10P50591 281 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 GATD1Q8NB37 220 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 ST6GALNAC6Q969X2 333 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 ZNF625Q96I27 306 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 LINC01587Q99440 93 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 LCTP09848 1927 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 WDR81Q562E7 1941 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 COL5A3P25940 1745 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 FAM3BP58499 235 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 PAX2Q02962 417 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 DNM1P46Q6ZS02 220 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 V9GYH0 126 aa13.67□□□□□ -0.22
CACNA1A-221ENST00000636012 NPIPB11E5RHQ5 1161 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 CRPP02741 224 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 C3orf36Q3SXR2 165 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 GOLT1AQ6ZVE7 132 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 S100A7L2Q5SY68 101 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 OR51G1Q8NGK1 321 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 DLL3Q9NYJ7 618 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 NSUN5P1Q3KNT7 163 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 MMP16P51512 607 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 RIPPLY3P57055 190 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 FOXJ2Q9P0K8 574 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 SBF2Q86WG5 1849 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 NYNRINQ9P2P1 1898 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 A0A1B0GWB2 263 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 SERF2P84101 59 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 ZNRF1Q8ND25 227 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 CDC42EP3Q9UKI2 254 aa13.66□□□□□ -0.22
CACNA1A-221ENST00000636012 ASAH2BP0C7U1 165 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 UBE2V2Q15819 145 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 SAP25Q8TEE9 199 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 TRBV20OR9-2A0A075B6H5 130 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 B9A039 149 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 PGLYRP1O75594 196 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 DOCK4Q8N1I0 1966 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 RALGAPA2Q2PPJ7 1873 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 C17orf51A8MQB3 221 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 RRHO14718 337 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 FAM209BQ5JX69 171 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 MRPL18Q9H0U6 180 aaKnown RBP13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 COX6A1P12074 109 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 MESP2Q0VG99 397 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 COL11A2P13942 1736 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 CLPSP04118 112 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 OR10J3Q5JRS4 329 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 LINC00305Q7Z4B0 112 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 TRGC1P0CF51 173 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
CACNA1A-221ENST00000636012 SIGLEC5O15389 551 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 PRB2P02812 416 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 GLIPR1P48060 266 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 HELZP42694 1942 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 MARCH11A6NNE9 402 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 MOSP00540 346 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 IGKV1D-33P01593 117 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 IGKV1-33P01594 117 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 BCL2P10415 239 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 TMEM74BQ9NUR3 256 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 LEPROTL1O95214 131 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 RPS20P60866 119 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 SCARF2Q96GP6 870 aaPredicted RBP13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 IGKV1-8A0A0C4DH67 115 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 SRD5A1P18405 259 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 LURAP1LQ8IV03 231 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 C10orf111Q8N326 155 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 OR2K2Q8NGT1 345 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 GSN-AS1Q9NRJ2 163 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 CYSLTR1Q9Y271 337 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 IGHV3OR16-8A0A075B7F1 116 aa13.64□□□□□ -0.23
CACNA1A-221ENST00000636012 CXorf65A6NEN9 183 aa13.63□□□□□ -0.23
CACNA1A-221ENST00000636012 KLF4O43474 513 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms