RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 AKAIN1P0CW23 69 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 HLA-GP17693 338 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 PPP5CP53041 499 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 C10orf55Q5SWW7 151 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 TBC1D26Q86UD7 250 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 LHFPL1Q86WI0 220 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 OR4D10Q8NGI6 311 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 TERB2Q8NHR7 220 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 ZFAND1Q8TCF1 268 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 SLC2A9Q9NRM0 540 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 FAM212BQ9NTI7 297 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-209ENST00000635450 TMEM140Q9NV12 185 aa12.03□□□□□ -0.48
LINC00339-209ENST00000635450 STAB2Q8WWQ8 2551 aa12.02□□□□□ -0.48
LINC00339-209ENST00000635450 MARCH11A6NNE9 402 aa12.02□□□□□ -0.49
LINC00339-209ENST00000635450 SEC14L6B5MCN3 397 aa12.02□□□□□ -0.49
LINC00339-209ENST00000635450 LINC01619G3V211 115 aa12.02□□□□□ -0.49
LINC00339-209ENST00000635450 UPK2O00526 184 aa12.02□□□□□ -0.49
LINC00339-209ENST00000635450 GSTZ1O43708 216 aaPredicted RBP12.02□□□□□ -0.49
LINC00339-209ENST00000635450 RPA2P15927 270 aa12.02□□□□□ -0.49
LINC00339-209ENST00000635450 CCDC71LQ8N9Z2 235 aa12.02□□□□□ -0.49
LINC00339-209ENST00000635450 ADAD2Q8NCV1 583 aaKnown RBP12.02□□□□□ -0.49
LINC00339-209ENST00000635450 B9D2Q9BPU9 175 aa12.02□□□□□ -0.49
LINC00339-209ENST00000635450 COMMD5Q9GZQ3 224 aa12.02□□□□□ -0.49
LINC00339-209ENST00000635450 HUWE1Q7Z6Z7 4374 aaKnown RBP12.02□□□□□ -0.49
LINC00339-209ENST00000635450 HMX3A6NHT5 357 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 SNAPC5O75971 98 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 KRASP01116 189 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
LINC00339-209ENST00000635450 ZNF735P0CB33 412 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 ECI1P42126 302 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 PIGPP57054 158 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 RND3P61587 244 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 CD69Q07108 199 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 TTC9CQ8N5M4 171 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 USMG5Q96IX5 58 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 SOSTQ9BQB4 213 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 NDUFA13Q9P0J0 144 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 COPZ2Q9P299 210 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 ZNF257Q9Y2Q1 563 aa12.01□□□□□ -0.49
LINC00339-209ENST00000635450 IGHV4OR15-8A0A075B7B6 117 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 A0A087WW49 117 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 ANKRD20A5PA0PJZ0 165 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 DHFRP00374 187 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 SERPINE2P07093 398 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 IL6RP08887 468 aaPredicted RBP12□□□□□ -0.49
LINC00339-209ENST00000635450 PI3P19957 117 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 G6PCP35575 357 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 ZNF585BQ52M93 769 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 PYDC2Q56P42 97 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 C9orf66Q5T8R8 295 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 FAAP20Q6NZ36 180 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 OR4C16Q8NGL9 310 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 PRRT1Q99946 306 aa12□□□□□ -0.49
LINC00339-209ENST00000635450 RANGRFQ9HD47 186 aaPredicted RBP12□□□□□ -0.49
LINC00339-209ENST00000635450 C14orf166Q9Y224 244 aaKnown RBP12□□□□□ -0.49
LINC00339-209ENST00000635450 TRAV3A0A0B4J244 114 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 FAM223BA6NKX1 122 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 NPIPB5A8MRT5 1133 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 TEX22C9J3V5 150 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 E7EUB6 86 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 FGF2P09038 288 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 RHOGP84095 191 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 FAM223AQ8IWN6 122 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 CADM3Q8N126 398 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 OR13C8Q8NGS7 320 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 MARCH1Q8TCQ1 289 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 TSC22D3Q99576 134 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 THAP7Q9BT49 309 aaPredicted RBP11.99□□□□□ -0.49
LINC00339-209ENST00000635450 ZMAT5Q9UDW3 170 aaKnown RBP11.99□□□□□ -0.49
LINC00339-209ENST00000635450 SCP2D1Q9UJQ7 156 aa11.99□□□□□ -0.49
LINC00339-209ENST00000635450 LSM4Q9Y4Z0 139 aaKnown RBP11.99□□□□□ -0.49
LINC00339-209ENST00000635450 ANKRD34BA5PLL1 514 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 H0Y980 276 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 OVOL1O14753 267 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 PRH1P02810 166 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 CTSDP07339 412 aaPredicted RBP11.98□□□□□ -0.49
LINC00339-209ENST00000635450 DEFA4P12838 97 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 MYOD1P15172 320 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 PTBP1P26599 531 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00339-209ENST00000635450 SLURP1P55000 103 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 OR2B8PP59922 312 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 DEFA5Q01523 94 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 ATP5G2Q06055 141 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 SPANXN2Q5MJ10 180 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 THOC7Q6I9Y2 204 aaKnown RBP11.98□□□□□ -0.49
LINC00339-209ENST00000635450 H2BFWTQ7Z2G1 175 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 Q8N402 240 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 OR1L8Q8NGR8 309 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 SRSF8Q9BRL6 282 aaKnown RBP11.98□□□□□ -0.49
LINC00339-209ENST00000635450 QTRT1Q9BXR0 403 aaKnown RBP11.98□□□□□ -0.49
LINC00339-209ENST00000635450 MCUBQ9NWR8 336 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 FKBP11Q9NYL4 201 aa11.98□□□□□ -0.49
LINC00339-209ENST00000635450 C3orf85A0A1B0GTC6 90 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 ATG12O94817 140 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 TRAPPC2P0DI81 140 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 TRAPPC2BP0DI82 140 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 ZP3P21754 424 aa11.97□□□□□ -0.49
LINC00339-209ENST00000635450 PSMB6P28072 239 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms