RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 TMBIM6P55061 237 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 UCP3P55916 312 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 OR2B8PP59922 312 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 TATDN3Q17R31 274 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 KLK9Q2XQG4 91 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 C15orf32Q32M92 178 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 ABHD1Q96SE0 405 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 COMMD5Q9GZQ3 224 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 KLK9Q9UKQ9 250 aa16.37■□□□□ 0.21
RAB28-208ENST00000630951 OR2J3O76001 311 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 AREGP15514 252 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 CTRB1P17538 263 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 ERVK-16P61578 105 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 EXOSC2Q13868 293 aaKnown RBP16.36■□□□□ 0.21
RAB28-208ENST00000630951 RPEL1Q2QD12 228 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 CTRB2Q6GPI1 263 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 OR9G4Q8NGQ1 327 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 FCAMRQ8WWV6 532 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 SRSF8Q9BRL6 282 aaKnown RBP16.36■□□□□ 0.21
RAB28-208ENST00000630951 RSRP1Q9BUV0 290 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 FAM212BQ9NTI7 297 aaPredicted RBP16.36■□□□□ 0.21
RAB28-208ENST00000630951 MTFP1Q9UDX5 166 aa16.36■□□□□ 0.21
RAB28-208ENST00000630951 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.35■□□□□ 0.21
RAB28-208ENST00000630951 TRAV3A0A0B4J244 114 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 CGB1A6NKQ9 187 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 MARCH11A6NNE9 402 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 LY86O95711 162 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 MYOD1P15172 320 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 RPL5P46777 297 aaKnown RBP16.35■□□□□ 0.21
RAB28-208ENST00000630951 SYNJ2BPP57105 145 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 ZNF585BQ52M93 769 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 SLC38A6Q8IZM9 456 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 OR52I2Q8NH67 350 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 MIXL1Q9H2W2 232 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 COL7A1Q02388 2944 aa16.35■□□□□ 0.21
RAB28-208ENST00000630951 RGS5O15539 181 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 SPNP16150 400 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 TBPP20226 339 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 LPAR6P43657 344 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 PHLDA2Q53GA4 152 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 FANCD2OSQ96PS1 177 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 FBXL7Q9UJT9 491 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 M0QYG6 137 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 IGLV1-51P01701 117 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 IFNA6P05013 189 aa16.34■□□□□ 0.21
RAB28-208ENST00000630951 HIST1H1BP16401 226 aaKnown RBP16.34■□□□□ 0.21
RAB28-208ENST00000630951 RNASE10Q5GAN6 216 aaKnown RBP16.34■□□□□ 0.21
RAB28-208ENST00000630951 THOC7Q6I9Y2 204 aaKnown RBP16.34■□□□□ 0.21
RAB28-208ENST00000630951 BMPR1BO00238 502 aa16.33■□□□□ 0.2
RAB28-208ENST00000630951 CTDSP2O14595 271 aa16.33■□□□□ 0.2
RAB28-208ENST00000630951 KRASP01116 189 aa16.33■□□□□ 0.2
RAB28-208ENST00000630951 DEFA4P12838 97 aa16.33■□□□□ 0.2
RAB28-208ENST00000630951 RNASE12Q5GAN4 147 aaKnown RBP16.33■□□□□ 0.2
RAB28-208ENST00000630951 IL34Q6ZMJ4 242 aa16.33■□□□□ 0.2
RAB28-208ENST00000630951 ARRDC1Q8N5I2 433 aa16.33■□□□□ 0.2
RAB28-208ENST00000630951 QTRT1Q9BXR0 403 aaKnown RBP16.33■□□□□ 0.2
RAB28-208ENST00000630951 SIGLEC8Q9NYZ4 499 aa16.33■□□□□ 0.2
RAB28-208ENST00000630951 CCDC59Q9P031 241 aaKnown RBP16.33■□□□□ 0.2
RAB28-208ENST00000630951 IGLC7A0M8Q6 106 aa16.32■□□□□ 0.2
RAB28-208ENST00000630951 CD3DP04234 171 aa16.32■□□□□ 0.2
RAB28-208ENST00000630951 GP9P14770 177 aa16.32■□□□□ 0.2
RAB28-208ENST00000630951 RPA2P15927 270 aa16.32■□□□□ 0.2
RAB28-208ENST00000630951 MRPS10P82664 201 aaKnown RBP16.32■□□□□ 0.2
RAB28-208ENST00000630951 C19orf35Q6ZS72 473 aa16.32■□□□□ 0.2
RAB28-208ENST00000630951 LAX1Q8IWV1 398 aa16.32■□□□□ 0.2
RAB28-208ENST00000630951 DYNC2LI1Q8TCX1 351 aa16.32■□□□□ 0.2
RAB28-208ENST00000630951 SMAD5-AS1Q9Y6J3 95 aa16.32■□□□□ 0.2
RAB28-208ENST00000630951 GABARAPH6UMI1 98 aa16.31■□□□□ 0.2
RAB28-208ENST00000630951 HSD17B13Q7Z5P4 300 aaPredicted RBP16.31■□□□□ 0.2
RAB28-208ENST00000630951 TBC1D26Q86UD7 250 aa16.31■□□□□ 0.2
RAB28-208ENST00000630951 LHFPL1Q86WI0 220 aa16.31■□□□□ 0.2
RAB28-208ENST00000630951 IGLV11-55A0A075B6I3 123 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 NDUFB8O95169 186 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 REG1AP05451 166 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 PTBP1P26599 531 aaKnown RBP eCLIP16.3■□□□□ 0.21e-6■■■■■ 34.9
RAB28-208ENST00000630951 G6PCP35575 357 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 SSBP1Q04837 148 aaKnown RBP16.3■□□□□ 0.2
RAB28-208ENST00000630951 TMEM229BQ8NBD8 167 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 ZNF486Q96H40 463 aaPredicted RBP16.3■□□□□ 0.2
RAB28-208ENST00000630951 RABL2AQ9UBK7 228 aaPredicted RBP16.3■□□□□ 0.2
RAB28-208ENST00000630951 PEMTQ9UBM1 199 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 RABL2BQ9UNT1 228 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 TEX50A0A1B0GTY4 177 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 SNAPC5O75971 98 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 NHLRC4P0CG21 123 aaPredicted RBP16.3■□□□□ 0.2
RAB28-208ENST00000630951 TRAPPC2P0DI81 140 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 TRAPPC2BP0DI82 140 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 TAS2R19P59542 299 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 OR1L8Q8NGR8 309 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 TSC22D3Q99576 134 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 DMRT1Q9Y5R6 373 aa16.3■□□□□ 0.2
RAB28-208ENST00000630951 NOL3O60936 208 aaKnown RBP16.29■□□□□ 0.2
RAB28-208ENST00000630951 CD74P04233 296 aa16.29■□□□□ 0.2
RAB28-208ENST00000630951 CSN3P07498 182 aa16.29■□□□□ 0.2
RAB28-208ENST00000630951 EEF1AKMT3Q96AZ1 226 aa16.29■□□□□ 0.2
RAB28-208ENST00000630951 CXorf58Q96LI9 332 aa16.29■□□□□ 0.2
RAB28-208ENST00000630951 NDUFA4L2Q9NRX3 87 aa16.29■□□□□ 0.2
RAB28-208ENST00000630951 FKBP11Q9NYL4 201 aa16.29■□□□□ 0.2
RAB28-208ENST00000630951 GGCTO75223 188 aaKnown RBP16.28■□□□□ 0.2
RAB28-208ENST00000630951 RND3P61587 244 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms