RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 IRF3Q14653 427 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 ODF3L2Q3SX64 289 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 ZNF502Q8TBZ5 544 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 GATAD1Q8WUU5 269 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 GALNT14Q96FL9 552 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 TAS2R8Q9NYW2 309 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 THYN1Q9P016 225 aa11.56□□□□□ -0.56
PDLIM3-213ENST00000629667 IGKV1D-13A0A0B4J2D9 117 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 OR4C46A6NHA9 309 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 PDCD5O14737 125 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 IFNA4P05014 189 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 IGKV1-13P0DP09 117 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 FCGR2BP31994 310 aaPredicted RBP11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 ARL6IP1Q15041 203 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 MFSD4AQ8N468 514 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 OR5B3Q8NH48 314 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 ZNF436Q9C0F3 470 aaPredicted RBP11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 C6orf62Q9GZU0 229 aaPredicted RBP11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 MFFQ9GZY8 342 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 MAP6D1Q9H9H5 199 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 HRASLSQ9HDD0 168 aa11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 ELF5Q9UKW6 265 aaPredicted RBP11.55□□□□□ -0.56
PDLIM3-213ENST00000629667 KIAA1109Q2LD37 5005 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 CGB1A6NKQ9 187 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 TGOLN2O43493 480 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 RPA2P15927 270 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 PTBP1P26599 531 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 OR10A3P58181 314 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 BRWD1-AS2P59051 145 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 MLLT11Q13015 90 aaPredicted RBP11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 RBMS2Q15434 407 aaKnown RBP11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 ZNF66Q6ZN08 573 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 OR4A5Q8NH83 315 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 C11orf45Q8TAV5 145 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 TMEM190Q8WZ59 177 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 AIFM2Q9BRQ8 373 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 ATG5Q9H1Y0 275 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 ACOT13Q9NPJ3 140 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 DAZ1Q9NQZ3 744 aaKnown RBP11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 BET1LQ9NYM9 111 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 FBXL17Q9UF56 701 aa11.54□□□□□ -0.56
PDLIM3-213ENST00000629667 IFITM5A6NNB3 132 aa11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 S1PR2O95136 353 aa11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 NANOS2P60321 138 aaKnown RBP11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 EIF4EBP1Q13541 118 aaPredicted RBP11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 RCN1Q15293 331 aa11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 TIMM50Q3ZCQ8 353 aa11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 CNIH2Q6PI25 160 aa11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 GPHA2Q96T91 129 aa11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 RARRES2Q99969 163 aa11.53□□□□□ -0.56
PDLIM3-213ENST00000629667 OR2T8A6NH00 312 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 CYB5BO43169 146 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 OR2B8PP59922 312 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 PRR20EP86478 221 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 PRR20CP86479 221 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 PRR20DP86480 221 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 PRR20BP86481 221 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 PRR20AP86496 221 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 CDNFQ49AH0 187 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 OGFRL1Q5TC84 451 aaPredicted RBP11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 APRG1Q8IVJ8 170 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 CD300LFQ8TDQ1 290 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 VN1R17PQ8TDU5 208 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 MGLLQ99685 303 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 C20orf24Q9BUV8 137 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 COMMD5Q9GZQ3 224 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 CSTL1Q9H114 145 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 DCSTAMPQ9H295 470 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 VCXQ9H320 206 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 TPRKBQ9Y3C4 175 aa11.52□□□□□ -0.57
PDLIM3-213ENST00000629667 IGLC7A0M8Q6 106 aa11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 MPTX1A8MV57 137 aa11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 TNFSF12O43508 249 aa11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 TCTAP57738 103 aa11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 HACD4Q5VWC8 232 aa11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 C2CD4CQ8TF44 421 aa11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 BSCL2Q96G97 398 aaPredicted RBP11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 SRSF8Q9BRL6 282 aaKnown RBP11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 CCDC90BQ9GZT6 254 aa11.51□□□□□ -0.57
PDLIM3-213ENST00000629667 TRAV1-2A0A0B4J238 106 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 NDUFA4O00483 81 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 RGS10O43665 173 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 CTSDP07339 412 aaPredicted RBP11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 RAB3BP20337 219 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 MYL9P24844 172 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 SLC25A24Q6NUK1 477 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 SPAG16Q8N0X2 631 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 OR11H2Q8NH07 326 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 NUDCD2Q8WVJ2 157 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 ANXA10Q9UJ72 324 aa11.5□□□□□ -0.57
PDLIM3-213ENST00000629667 IGHV3OR16-8A0A075B7F1 116 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 TRAV3A0A0B4J244 114 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 K7EMT4 169 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 UPK2O00526 184 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 EBAG9O00559 213 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 ZNF207O43670 478 aaKnown RBP11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 CMC4P56277 68 aaPredicted RBP11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 TAS2R31P59538 309 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 GNG2P59768 71 aa11.49□□□□□ -0.57
PDLIM3-213ENST00000629667 SPSB3Q6PJ21 355 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms