RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 F8W036 122 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 NDUFA2O43678 99 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 DIRAS3O95661 229 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 FBP1P09467 338 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 NPBWR1P48145 328 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 GPM6AP51674 278 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 PROK1P58294 105 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 NMSQ5H8A3 153 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 KRBOX4Q5JUW0 171 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 SLC35E4Q6ICL7 350 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 Q6ZRG5 221 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 C9orf139Q6ZV77 190 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 VMO1Q7Z5L0 202 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 FAM216BQ8N7L0 139 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 MRPL30Q8TCC3 161 aaKnown RBP3.9□□□□□ -1.78
LINC00550-201ENST00000629293 AIFM2Q9BRQ8 373 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 TMEM231Q9H6L2 316 aa3.9□□□□□ -1.78
LINC00550-201ENST00000629293 KMT2CQ8NEZ4 4911 aaKnown RBP3.9□□□□□ -1.79
LINC00550-201ENST00000629293 TRAV38-1A0A0B4J264 116 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 IGKV1D-13A0A0B4J2D9 117 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 OR5B21A6NL26 309 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF732B4DXR9 585 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 RNASEK-C17orf49H0YIS7 233 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 TNFRSF13BO14836 293 aaPredicted RBP3.9□□□□□ -1.79
LINC00550-201ENST00000629293 ST8SIA3O43173 380 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 SYNGR1O43759 233 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 SNAPINO95295 136 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 SCTP09683 121 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 OR8U9P0C7N5 309 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 IGKV1-13P0DP09 117 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 NDUFB7P17568 137 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 UCP1P25874 307 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 IER3P46695 156 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 FLI1Q01543 452 aaPredicted RBP3.9□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF841Q6ZN19 808 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 TBC1D26Q86UD7 250 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 MKXQ8IYA7 352 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 COMMD1Q8N668 190 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 OR8U1Q8NH10 309 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 CABLES2Q9BTV7 478 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 SMIM3Q9BZL3 60 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 PKIBQ9C010 78 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 TREM1Q9NP99 234 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 ZC4H2Q9NQZ6 224 aa3.9□□□□□ -1.79
LINC00550-201ENST00000629293 TET2Q6N021 2002 aaPredicted RBP3.9□□□□□ -1.79
LINC00550-201ENST00000629293 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 OOEPA6NGQ2 149 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 IQCF6A8MYZ5 107 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 H3BUX3 64 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 NDUFA7O95182 113 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 LIPFP07098 398 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SFTA3P0C7M3 94 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 PPIAL4GP0DN37 164 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 KIR2DS4P43632 304 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 IL24Q13007 206 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 KIR2DS1Q14954 304 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 DEFB121Q5J5C9 76 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 TMEM88Q6PEY1 159 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 ZNF818PQ6ZRF7 136 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 Q6ZWC4 215 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 C5orf24Q7Z6I8 188 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 CBLN2Q8IUK8 224 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 ODF3L1Q8IXM7 274 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SELENOHQ8IZQ5 122 aaKnown RBP3.89□□□□□ -1.79
LINC00550-201ENST00000629293 BATF2Q8N1L9 274 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 PLPPR1Q8TBJ4 325 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 LRRC29Q8WV35 223 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 IL22RA2Q969J5 263 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 RIMS4Q9H426 269 aaPredicted RBP3.89□□□□□ -1.79
LINC00550-201ENST00000629293 FAM212BQ9NTI7 297 aaPredicted RBP3.89□□□□□ -1.79
LINC00550-201ENST00000629293 MPC1Q9Y5U8 109 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 KIAA2026Q5HYC2 2103 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 BORCS7-ASMTA0A0B4J1R7 106 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 TRAV24A0A0B4J272 114 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 H0Y980 276 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 K7N7A8 449 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 PITX3O75364 302 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 CTXN2P0C2S0 81 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 MMP9P14780 707 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SAA4P35542 130 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SNCAP37840 140 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 GABRA2P47869 451 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 EWSR1Q01844 656 aaKnown RBP eCLIP3.89□□□□□ -1.79
LINC00550-201ENST00000629293 GAPTQ8N292 157 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SUMF2Q8NBJ7 301 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 OR51I2Q9H344 312 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 SPACA1Q9HBV2 294 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 CACFD1Q9UGQ2 172 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 VPREB3Q9UKI3 123 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 PRELID3BQ9Y3B1 194 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 A0A1B0GW64 132 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 IGSF23A1L1A6 192 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 AP4M1O00189 453 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 TUBG1P23258 451 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 RAB5CP51148 216 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 GNG3P63215 75 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 HLA-DRB3P79483 266 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 Q6P435 159 aa3.89□□□□□ -1.79
LINC00550-201ENST00000629293 HAGHLQ6PII5 290 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms