RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 NEGR1Q7Z3B1 354 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 ATP5L2Q7Z4Y8 100 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 SLC25A42Q86VD7 318 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 ATOH7Q8N100 152 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 MS4A6EQ96DS6 147 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 RBMXL1Q96E39 390 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 IMMP2LQ96T52 175 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM59Q9BXS4 323 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 PLA2G12AQ9BZM1 189 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 HS3ST3B1Q9Y662 390 aa3.29□□□□□ -1.88
R3HDM1-220ENST00000628915 TSC2P49815 1807 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 A0A1B0GX51 115 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 TLCD2A6NGC4 264 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PRRG2O14669 202 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 CRXO43186 299 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 DUS4LO95620 317 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MT-ATP8P03928 68 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PPP1CCP36873 323 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 DLX1P56177 255 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 CDK5R1Q15078 307 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 IBA57Q5T440 356 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 TSPO2Q5TGU0 170 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MORN3Q6PF18 240 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 RSPO2Q6UXX9 243 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 LINC00336Q6ZUF6 198 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 Q6ZUT4 128 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PAQR4Q8N4S7 273 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MORN4Q8NDC4 146 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 OR1L3Q8NH93 324 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNRF2Q8NHG8 242 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 RNF128Q8TEB7 428 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 LRRC29Q8WV35 223 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MLST8Q9BVC4 326 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 CHST6Q9GZX3 395 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PARP12Q9H0J9 701 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 JPT2Q9H910 190 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM242Q9NWH2 141 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 SIGLEC8Q9NYZ4 499 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 DMXL2Q8TDJ6 3036 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 C9orf118A6NHY6 69 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 ZNF736B4DX44 427 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 GGTLC3B5MD39 225 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 F8W1H4 67 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM250H0YL14 139 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 ZFAND5O76080 213 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 SLC25A14O95258 325 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 GHRHP01286 108 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PIRTP0C851 137 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 EDNRAP25101 427 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 LMO2P25791 158 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 HERVK_113P63121 156 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 UNC119Q13432 240 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 GAGE13Q4V321 117 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MS4A13Q5J8X5 152 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM99Q8N816 258 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 TEX45Q8NA69 505 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 OR2T10Q8NGZ9 312 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 C2orf15Q8WU43 125 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 COPS9Q8WXC6 57 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MRPL24Q96A35 216 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 KLF12Q9Y4X4 402 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PLXND1Q9Y4D7 1925 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 F6UB75 175 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MLNRO43193 412 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 BUB3O43684 328 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PPP1R3DO95685 299 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 SLURP2P0DP57 97 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PPP1CBP62140 327 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 ELOCQ15369 112 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 SLC25A47Q6Q0C1 308 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 TMEM136Q6ZRR5 245 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM90A1Q86YD7 464 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PIANPQ8IYJ0 282 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 LINC00528Q8N1L1 170 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MBD3L2Q8NHZ7 208 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 NEURL3Q96EH8 262 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 ZC2HC1AQ96GY0 325 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 S1PR3Q99500 378 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PDCD1LG2Q9BQ51 273 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 CDH20Q9HBT6 801 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 SMCHD1A6NHR9 2005 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 PLXNB2O15031 1838 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 MYLKQ15746 1914 aa3.28□□□□□ -1.88
R3HDM1-220ENST00000628915 FAM236AA0A1B0GUQ0 79 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 FAM236BA0A1B0GV22 79 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 C17orf112F2Z3M2 114 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 NAPSAO96009 420 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 CSN3P07498 182 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 PTGDSP41222 190 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF90Q03938 601 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF816Q0VGE8 651 aaPredicted RBP3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 FAM166AQ6J272 317 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 TRAPPC6BQ86SZ2 158 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 TMEM150AQ86TG1 271 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 GTSCR1Q86UQ5 136 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 OSR1Q8TAX0 266 aaPredicted RBP3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 TMEM170AQ8WVE7 144 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 KLF16Q9BXK1 252 aaPredicted RBP3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 WNT10AQ9GZT5 417 aa3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 RNF115Q9Y4L5 304 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms