RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 HARBI1Q96MB7 349 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 SIRPDQ9H106 197 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 UBQLN2Q9UHD9 624 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 WASHC3Q9Y3C0 194 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 INSIG2Q9Y5U4 225 aa7.66□□□□□ -1.18
PDLIM5-223ENST00000627587 PLXNB1O43157 2135 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 FAM24AA6NFZ4 105 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 ODF3BA8MYP8 253 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 LEUTXA8MZ59 168 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 B4DSR2 109 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 IFNA17P01571 189 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 IAPPP10997 89 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 TPT1P13693 172 aaKnown RBP7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 HTR1DP28221 377 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 CEACAM3P40198 252 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 TAS2R30P59541 319 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 OR2B8PP59922 312 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 RELBQ01201 579 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 EWSR1Q01844 656 aaKnown RBP eCLIP7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 NHLH2Q02577 135 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 TMEM177Q53S58 311 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 OR4A47Q6IF82 309 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 TMEM252Q8N6L7 170 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 RBKSQ9H477 322 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 DPM3Q9P2X0 92 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 FBXL17Q9UF56 701 aa7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
PDLIM5-223ENST00000627587 IGHV1-3A0A0C4DH29 117 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 CEBPZOSA8MTT3 80 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 RNASEK-C17orf49H0YIS7 233 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 H3BP45 60 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 TOX4O94842 621 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 EIF5AP63241 154 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 SRSF2Q01130 221 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 BAXQ07812 192 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 ZNF429Q86V71 674 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 STX12Q86Y82 276 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 OR8H3Q8N146 312 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 SGMS2Q8NHU3 365 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 STOML3Q8TAV4 291 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 RITA1Q96K30 269 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 SMIM8Q96KF7 97 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 CIB3Q96Q77 187 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 QTRT1Q9BXR0 403 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 SMIM3Q9BZL3 60 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 LPAR2Q9HBW0 351 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 WFDC1Q9HC57 220 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 PSENENQ9NZ42 101 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 RPS10-NUDT3A0A1W2PQS6 291 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 C15orf61A6NNL5 157 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 JTBO76095 146 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 SAA1P0DJI8 122 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 SPCS3P61009 180 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 RPS16P62249 146 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 TPTE2P1Q5T6R2 138 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 ALKAL2Q6UX46 152 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 MOB3BQ86TA1 216 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 OR52E5Q8NH55 327 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 VSTM2AQ8TAG5 236 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 DTD1Q8TEA8 209 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 ZNF418Q8TF45 676 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 SCARB1Q8WTV0 552 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 PHYHIPLQ96FC7 376 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 JMJD8Q96S16 334 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 MS4A7Q9GZW8 240 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 BET1LQ9NYM9 111 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 NUP50Q9UKX7 468 aa7.64□□□□□ -1.19
PDLIM5-223ENST00000627587 IGHV3-72A0A0B4J1Y9 119 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 A0A1W2PPI3 338 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 CST7O76096 145 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 LY86O95711 162 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 IGLV2-23P01705 113 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 PAX6P26367 422 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 HTR2BP41595 481 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 COMPP49747 757 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 LGALS4P56470 323 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 RAB14P61106 215 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 NDUFA5Q16718 116 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 MRGPRG-AS1Q2M3A8 158 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 PDLIM3Q53GG5 364 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 FBLN7Q53RD9 439 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 SPANXN5Q5MJ07 72 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 RPL7L1Q6DKI1 246 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 TREML4Q6UXN2 200 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 LHFPL4Q7Z7J7 247 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 HAPLN4Q86UW8 402 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 BAP18Q8IXM2 172 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 PDZD9Q8IXQ8 264 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 PUSL1Q8N0Z8 303 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 AJUBAQ96IF1 538 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 CLCC1Q96S66 551 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 TBX15Q96SF7 602 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 TMEM14BQ9NUH8 114 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 PRNDQ9UKY0 176 aa7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 FOXA2Q9Y261 457 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-223ENST00000627587 BORCS7-ASMTA0A0B4J1R7 106 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 A0A1W2PRD5 423 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 A0A1W2PRF3 423 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 A0A1W2PRM7 423 aa7.62□□□□□ -1.19
PDLIM5-223ENST00000627587 UPK2O00526 184 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms