RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TMEM268Q5VZI3 342 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 ZNF329Q86UD4 541 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 CADM3Q8N126 398 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 LGI3Q8N145 548 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 OR5AU1Q8NGC0 362 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 OR4X2Q8NGF9 303 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 CASTOR1Q8WTX7 329 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 PRR13Q9NZ81 148 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 NUBP2Q9Y5Y2 271 aa11.56□□□□□ -0.56
PNKP-221ENST00000627317 TRAV3A0A0B4J244 114 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 PIGBOS1A0A0B4J2F0 54 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 G3V318 75 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 FBXO24O75426 580 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 RBMXL2O75526 392 aaKnown RBP11.55□□□□□ -0.56
PNKP-221ENST00000627317 SFT2D2O95562 160 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 IGKV1-5P01602 117 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 HLA-AP01891 365 aaKnown RBP11.55□□□□□ -0.56
PNKP-221ENST00000627317 H2AFB2P0C5Z0 115 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 OR9G9P0C7N8 305 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 CRIP2P52943 208 aaPredicted RBP11.55□□□□□ -0.56
PNKP-221ENST00000627317 RAB25P57735 213 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 OR2B8PP59922 312 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 C4orf46Q504U0 113 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 UNQ5815/PRO19632Q6UWF5 114 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 SELENOHQ8IZQ5 122 aaKnown RBP11.55□□□□□ -0.56
PNKP-221ENST00000627317 C11orf44Q8N8P7 122 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 OR4A16Q8NH70 328 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 LHFPL5Q8TAF8 219 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 IL22RA2Q969J5 263 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 TMEM56Q96MV1 263 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 SPIN2AQ99865 258 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 SPIN2BQ9BPZ2 258 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 COMMD5Q9GZQ3 224 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 PRNDQ9UKY0 176 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 NSG2Q9Y328 171 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 TMEM56-RWDD3S4R434 201 aa11.55□□□□□ -0.56
PNKP-221ENST00000627317 MSGN1A6NI15 193 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 FGF2P09038 288 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 OR4E1P0C645 316 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 EGR2P11161 476 aaPredicted RBP11.54□□□□□ -0.56
PNKP-221ENST00000627317 DHRS2Q13268 280 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 HIST2H2BDQ6DRA6 164 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 C10orf99Q6UWK7 81 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 NRARPQ7Z6K4 114 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 LYG2Q86SG7 212 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 COMMD1Q8N668 190 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 SLC35G3Q8N808 338 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 LFNGQ8NES3 379 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 FYTTD1Q96QD9 318 aaKnown RBP11.54□□□□□ -0.56
PNKP-221ENST00000627317 PALMDQ9NP74 551 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 FKBP11Q9NYL4 201 aa11.54□□□□□ -0.56
PNKP-221ENST00000627317 FOXA2Q9Y261 457 aaPredicted RBP11.54□□□□□ -0.56
PNKP-221ENST00000627317 A0A1W2PN81 502 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 C9orf170A2RU37 121 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 C15orf61A6NNL5 157 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 OPN1MWP04001 364 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 IL6RP08887 468 aaPredicted RBP11.53□□□□□ -0.56
PNKP-221ENST00000627317 APELAP0DMC3 54 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 OPN1MW2P0DN77 364 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 OPN1MW3P0DN78 364 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 MYOD1P15172 320 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 CHRNA7P36544 502 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 IZUMO4Q1ZYL8 232 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 C2orf68Q2NKX9 166 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 AKIRIN2Q53H80 203 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 KHDC1LQ5JSQ8 128 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 TEX38Q6PEX7 206 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 PLET1Q6UQ28 207 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 FAM219AQ8IW50 185 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 OR1L8Q8NGR8 309 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 COQ8AQ8NI60 647 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
PNKP-221ENST00000627317 OR51B2Q9Y5P1 312 aa11.53□□□□□ -0.56
PNKP-221ENST00000627317 A0A0B4J2A0 478 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 A0A0G2JRQ6 117 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 DUXBA0A1W2PPF3 345 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 ADARB2-AS1A8MUL3 147 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 IGHG4P01861 327 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 P0C879 139 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 CD28P10747 220 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 CFHR3Q02985 330 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 FOXE3Q13461 319 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 DCTN2Q13561 401 aaKnown RBP11.52□□□□□ -0.57
PNKP-221ENST00000627317 ANKRD55Q3KP44 614 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 C19orf54Q5BKX5 351 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 CXorf66Q5JRM2 361 aaPredicted RBP11.52□□□□□ -0.57
PNKP-221ENST00000627317 DUSP18Q8NEJ0 188 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 LSM10Q969L4 123 aaKnown RBP11.52□□□□□ -0.57
PNKP-221ENST00000627317 TMEM68Q96MH6 324 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 HINT2Q9BX68 163 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 ALX4Q9H161 411 aaPredicted RBP11.52□□□□□ -0.57
PNKP-221ENST00000627317 TMEM14BQ9NUH8 114 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 SHPKQ9UHJ6 478 aa11.52□□□□□ -0.57
PNKP-221ENST00000627317 HMX3A6NHT5 357 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 DUS4LO95620 317 aaKnown RBP11.51□□□□□ -0.57
PNKP-221ENST00000627317 ELANEP08246 267 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 TRAPPC2P0DI81 140 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 TRAPPC2BP0DI82 140 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 PF4V1P10720 104 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 PPIFP30405 207 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms