RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 ZNF429Q86V71 674 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 SNX29P2Q8IUI4 249 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 CMTM1Q8IZ96 169 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 VKORC1L1Q8N0U8 176 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 SPAG16Q8N0X2 631 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 CD300LFQ8TDQ1 290 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 C15orf40Q8WUR7 153 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 SRSF12Q8WXF0 261 aaKnown RBP4.94□□□□□ -1.62
TCF4-249ENST00000625716 SNAPC3Q92966 411 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 USMG5Q96IX5 58 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 OR2A7Q96R45 310 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 OR4C12Q96R67 309 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 ZNF2Q9BSG1 426 aaPredicted RBP4.94□□□□□ -1.62
TCF4-249ENST00000625716 TINAGL1Q9GZM7 467 aaPredicted RBP4.94□□□□□ -1.62
TCF4-249ENST00000625716 ZNF430Q9H8G1 570 aaPredicted RBP4.94□□□□□ -1.62
TCF4-249ENST00000625716 SCPEP1Q9HB40 452 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 HRASLSQ9HDD0 168 aa4.94□□□□□ -1.62
TCF4-249ENST00000625716 WI2-2373I1.2A0A1W2PRP0 233 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 FAM223BA6NKX1 122 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 K7EIL1 84 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 RGS5O15539 181 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 HPGDSO60760 199 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 NOL3O60936 208 aaKnown RBP4.93□□□□□ -1.62
TCF4-249ENST00000625716 GABARAPO95166 117 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 BRI3O95415 125 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 IFNA6P05013 189 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 NQO2P16083 231 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 NAT1P18440 290 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 RCVRNP35243 200 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 RPL27AP46776 148 aaKnown RBP4.93□□□□□ -1.62
TCF4-249ENST00000625716 TAS2R31P59538 309 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 ERVK-16P61578 105 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 RPL8P62917 257 aaKnown RBP4.93□□□□□ -1.62
TCF4-249ENST00000625716 ATP5G2Q06055 141 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 CD69Q07108 199 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 RNF151Q2KHN1 245 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 RPEL1Q2QD12 228 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 FAM223AQ8IWN6 122 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 TTC9CQ8N5M4 171 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 DMBX1Q8NFW5 382 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 OR6Q1Q8NGQ2 317 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 OR51H1Q8NH63 302 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 OR4A5Q8NH83 315 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 TMEM167AQ8TBQ9 72 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 GPX8Q8TED1 209 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 DLX4Q92988 240 aaPredicted RBP4.93□□□□□ -1.62
TCF4-249ENST00000625716 FYTTD1Q96QD9 318 aaKnown RBP4.93□□□□□ -1.62
TCF4-249ENST00000625716 GPHA2Q96T91 129 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 NAA50Q9GZZ1 169 aaKnown RBP4.93□□□□□ -1.62
TCF4-249ENST00000625716 PEF1Q9UBV8 284 aaKnown RBP4.93□□□□□ -1.62
TCF4-249ENST00000625716 SCOCQ9UIL1 159 aa4.93□□□□□ -1.62
TCF4-249ENST00000625716 ZNF256Q9Y2P7 627 aaPredicted RBP4.93□□□□□ -1.62
TCF4-249ENST00000625716 CMYA5Q8N3K9 4069 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 GPR31O00270 319 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 CYB5BO43169 146 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 RBFOX2O43251 390 aaKnown RBP eCLIP4.92□□□□□ -1.62
TCF4-249ENST00000625716 PGLYRP1O75594 196 aaPredicted RBP4.92□□□□□ -1.62
TCF4-249ENST00000625716 RLN1P04808 185 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 SMIM18P0DKX4 95 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 DEFA4P12838 97 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 HLA-GP17693 338 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 GNRHRP30968 328 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 HRH1P35367 487 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 SSBP2P81877 361 aaPredicted RBP4.92□□□□□ -1.62
TCF4-249ENST00000625716 RHOGP84095 191 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 EIF4EBP1Q13541 118 aaPredicted RBP4.92□□□□□ -1.62
TCF4-249ENST00000625716 CTF1Q16619 201 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 RNASE12Q5GAN4 147 aaKnown RBP4.92□□□□□ -1.62
TCF4-249ENST00000625716 FAM209BQ5JX69 171 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 ASPHD1Q5U4P2 390 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 OR4A47Q6IF82 309 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 ACSM6Q6P461 480 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 CLVS1Q8IUQ0 354 aaPredicted RBP4.92□□□□□ -1.62
TCF4-249ENST00000625716 LYSMD2Q8IV50 215 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 PUSL1Q8N0Z8 303 aaKnown RBP4.92□□□□□ -1.62
TCF4-249ENST00000625716 NECAP1Q8NC96 275 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 ADAD2Q8NCV1 583 aaKnown RBP4.92□□□□□ -1.62
TCF4-249ENST00000625716 FCAMRQ8WWV6 532 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 MOB3AQ96BX8 217 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 PRR25Q96S07 402 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 COMMD5Q9GZQ3 224 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 PLEKHA2Q9HB19 425 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 BET1LQ9NYM9 111 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 COMMD9Q9P000 198 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 EXTL2Q9UBQ6 330 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 ANAPC10Q9UM13 185 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 ZNF257Q9Y2Q1 563 aa4.92□□□□□ -1.62
TCF4-249ENST00000625716 VWFP04275 2813 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 HMX3A6NHT5 357 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 NPIPB5A8MRT5 1133 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 SNAPC5O75971 98 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 TPPPO94811 219 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 PRH1P02810 166 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 ZNF735P0CB33 412 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 PGAM2P15259 253 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 RPA2P15927 270 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 HIST1H1BP16401 226 aaKnown RBP4.91□□□□□ -1.62
TCF4-249ENST00000625716 F2RP25116 425 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 LPAR6P43657 344 aa4.91□□□□□ -1.62
TCF4-249ENST00000625716 ALDH3B2P48448 385 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms