RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 OR1N2Q8NGR9 330 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 NDUFAF3Q9BU61 184 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 RTN4RQ9BZR6 473 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 RAB1BQ9H0U4 201 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 MS4A5Q9H3V2 200 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 HILPDAQ9Y5L2 63 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 IGKV1D-8A0A087WSZ0 117 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 IGKV1-9A0A0C4DH69 117 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 A0A1W2PQM1 296 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 C17orf98A8MV24 154 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 ATXN7O15265 892 aaPredicted RBP4.78□□□□□ -1.64
ERCC6-213ENST00000624341 NPIPB7O75200 414 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 FCGR2BP31994 310 aaPredicted RBP4.78□□□□□ -1.64
ERCC6-213ENST00000624341 RPL39P5Q59GN2 51 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 CDCP2Q5VXM1 449 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 OR51G1Q8NGK1 321 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 PRR7Q8TB68 274 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 TMEM54Q969K7 222 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 C1RLQ9NZP8 487 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 NCOR1O75376 2440 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 hCG_38984A0A1B0GV85 526 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 NUDT3O95989 172 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 IL6RP08887 468 aaPredicted RBP4.78□□□□□ -1.64
ERCC6-213ENST00000624341 RFPL3SP0C7P2 107 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 GFRA1P56159 465 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 DNLZQ5SXM8 178 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 GCSAMQ8N6F7 178 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF525Q8N782 197 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 WFDC1Q9HC57 220 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 ZNF319Q9P2F9 582 aa4.78□□□□□ -1.64
ERCC6-213ENST00000624341 SCN5AQ14524 2016 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 TRBV9A0A0B4J1U6 114 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 IGKV1D-13A0A0B4J2D9 117 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 C1QTNF9BB2RNN3 333 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 C12orf77C9JDV5 145 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 C16orf97H3BN30 126 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 IGKV1-13P0DP09 117 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 PCOLCEQ15113 449 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 PEAR1Q5VY43 1037 aaPredicted RBP4.77□□□□□ -1.65
ERCC6-213ENST00000624341 MBNL2Q5VZF2 373 aaKnown RBP4.77□□□□□ -1.65
ERCC6-213ENST00000624341 ZNRF1Q8ND25 227 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 OR10AG1Q8NH19 301 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 OR5P3Q8WZ94 311 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 TMEM70Q9BUB7 260 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 IL36BQ9NZH7 164 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 RABAC1Q9UI14 185 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 SPTAN1Q13813 2472 aaKnown RBP4.77□□□□□ -1.65
ERCC6-213ENST00000624341 INTS1Q8N201 2190 aaKnown RBP4.77□□□□□ -1.65
ERCC6-213ENST00000624341 F2RL2O00254 374 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 SERF1AO75920 110 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 GOLT1AQ6ZVE7 132 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 OR4A5Q8NH83 315 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 KLK15Q9H2R5 256 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 FOXD3Q9UJU5 478 aaPredicted RBP4.77□□□□□ -1.65
ERCC6-213ENST00000624341 NBASA2RRP1 2371 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 PGPEP1LA6NFU8 196 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 MOSP00540 346 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 C1QTNF9P0C862 333 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 COX6A1P12074 109 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 HEPN1Q6WQI6 88 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 DYNLRB2Q8TF09 96 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 LPAR2Q9HBW0 351 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 DOCK10Q96BY6 2186 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 C7orf71A4D174 169 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 SYNGR3O43761 229 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 CD5P06127 495 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 CD55P08174 381 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 CXCL1P09341 107 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 IGFBP2P18065 325 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 GATA2P23769 480 aaPredicted RBP4.77□□□□□ -1.65
ERCC6-213ENST00000624341 PTGDSP41222 190 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 GPR6P46095 362 aaPredicted RBP4.77□□□□□ -1.65
ERCC6-213ENST00000624341 PCSK4Q6UW60 755 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 ASCL5Q7RTU5 278 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 NLRC5Q86WI3 1866 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 DCTN5Q9BTE1 182 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 PLSCR2Q9NRY7 297 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 PTPRSQ13332 1948 aa4.77□□□□□ -1.65
ERCC6-213ENST00000624341 A0A0A6YYD4 124 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 IGHV3-35A0A0C4DH35 117 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 HOXB1P14653 301 aaPredicted RBP4.76□□□□□ -1.65
ERCC6-213ENST00000624341 MC5RP33032 325 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 CA7P43166 264 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 RBPMS2Q6ZRY4 209 aaKnown RBP4.76□□□□□ -1.65
ERCC6-213ENST00000624341 VWCEQ96DN2 955 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 HIST1H2BLQ99880 126 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 CYTL1Q9NRR1 136 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 JPT1Q9UK76 154 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 RALGAPA1Q6GYQ0 2036 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 IGKV3D-11A0A0A0MRZ8 115 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 SPAARA0A1B0GVQ0 90 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 COX5BP10606 129 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 ARF6P62330 175 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 SHISA5Q8N114 240 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 OR5R1Q8NH85 324 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 IDI2-AS1Q9NZ38 188 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 CADP27708 2225 aa4.76□□□□□ -1.65
ERCC6-213ENST00000624341 ANKRD36A6QL64 1941 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms