RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-215	ENST00000622972	IGKV1-5	P01602	117 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	SAA1	P0DJI8	122 aa	Predicted RBP	4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	RPA2	P15927	270 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	HERV-K104	P61576	105 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	RND3	P61587	244 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	DEFA5	Q01523	94 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF45	Q02386	682 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	C5orf64	Q2M2E5	130 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	KRTAP19-4	Q3LI73	84 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	SP6	Q3SY56	376 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	SCGB2B2	Q4G0G5	96 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	ACTBL2	Q562R1	376 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	LINC00299	Q6ZSB3	139 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	PDPN	Q86YL7	162 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	PUSL1	Q8N0Z8	303 aa	Known RBP	4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR11H1	Q8NG94	326 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	TERB2	Q8NHR7	220 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	TCTEX1D2	Q8WW35	142 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	WWC2-AS2	Q96NR7	200 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR5B12	Q96R08	314 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	PRR25	Q96S07	402 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	FAM103A1	Q9BTL3	118 aa	Known RBP	4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972	PARP11	Q9NR21	331 aa		4.56	□□□□□ -1.68
LINC00963-215	ENST00000622972		A0A0B4J293	547 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	CRYM-AS1	A6NIL9	109 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972		G3V318	75 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972		H7C2Y5	167 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	UPK1B	O75841	260 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	CA2	P00918	260 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	HLA-DRB1	P01911	266 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	CTSD	P07339	412 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR9G9	P0C7N8	305 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	F2R	P25116	425 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	CDX1	P47902	265 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	PIGP	P57054	158 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	MEF2D	Q14814	521 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	POU2AF1	Q16633	256 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	ECSCR	Q19T08	205 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR4A47	Q6IF82	309 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF66	Q6ZN08	573 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972		Q6ZRM9	215 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	SPAG16	Q8N0X2	631 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	TOMM5	Q8N4H5	51 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	STPG3	Q8N7X2	389 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	CASTOR1	Q8WTX7	329 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	GLYATL2	Q8WU03	294 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	C15orf40	Q8WUR7	153 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	C4orf3	Q8WVX3	66 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	SEC22A	Q96IW7	307 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	HARBI1	Q96MB7	349 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	CLCC1	Q96S66	551 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	HSD17B10	Q99714	261 aa	Known RBP	4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	ASCL2	Q99929	193 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	GHITM	Q9H3K2	345 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	MCUB	Q9NWR8	336 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	METTL1	Q9UBP6	276 aa	Known RBP	4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	RABL2B	Q9UNT1	228 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	RBM7	Q9Y580	266 aa	Known RBP	4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	DMRT1	Q9Y5R6	373 aa		4.55	□□□□□ -1.68
LINC00963-215	ENST00000622972	TRAV41	A0A0B4J266	112 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972		A0A1W2PN81	502 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	DISC1	C4P0D8	188 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	TEX22	C9J3V5	150 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972		H0Y980	276 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	MPPED1	O15442	326 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	LYRM1	O43325	122 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	SAP30	O75446	220 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	KBTBD11	O94819	623 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	NDUFB6	O95139	128 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	IGHG4	P01861	327 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	APOA2	P02652	100 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR5AC1	P0C628	307 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	OR8U8	P0C7N1	319 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	NHLRC4	P0CG21	123 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	APELA	P0DMC3	54 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	PGAM2	P15259	253 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ANXA7	P20073	488 aa	Known RBP	4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	UCP1	P25874	307 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	PSMB8	P28062	276 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	PPIF	P30405	207 aa	Known RBP	4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	MC5R	P33032	325 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	G6PC	P35575	357 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	CHRNA7	P36544	502 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	LPAR6	P43657	344 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	CRIP2	P52943	208 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	UBE2K	P61086	200 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	TSPAN5	P62079	268 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	CX3CL1	P78423	397 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	DHODH	Q02127	395 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF616	Q08AN1	781 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ASAH1	Q13510	395 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	PPP1R1A	Q13522	171 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	KIAA0141	Q14154	515 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	TMEM187	Q14656	261 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	PRSS8	Q16651	343 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ANKRD55	Q3KP44	614 aa		4.54	□□□□□ -1.68
LINC00963-215	ENST00000622972	ZNF57	Q68EA5	555 aa	Predicted RBP	4.54	□□□□□ -1.68

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