RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 OR4C13Q8NGP0 309 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 HSPB8Q9UJY1 196 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 OR2T8A6NH00 312 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 IFITM10A6NMD0 228 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 TNFSF10P50591 281 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 OR4A5Q8NH83 315 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 RBM14Q96PK6 669 aaKnown RBP13.6□□□□□ -0.23
GABRB3-215ENST00000622697 SCNM1Q9BWG6 230 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 HSPB7Q9UBY9 170 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 RABAC1Q9UI14 185 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 PPIAL4CA0A0B4J2A2 164 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 ZNF729A6NN14 1252 aaPredicted RBP13.6□□□□□ -0.23
GABRB3-215ENST00000622697 PPIAL4GP0DN37 164 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 CD99P14209 185 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 FAM131CQ96AQ9 280 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 POLEQ07864 2286 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 M0QZK8 103 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 FGF16O43320 207 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 GGCTO75223 188 aaKnown RBP13.6□□□□□ -0.23
GABRB3-215ENST00000622697 CRYGSP22914 178 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 ZNF146Q15072 292 aa13.6□□□□□ -0.23
GABRB3-215ENST00000622697 MRPL37Q9BZE1 423 aaKnown RBP13.6□□□□□ -0.23
GABRB3-215ENST00000622697 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.59□□□□□ -0.23
GABRB3-215ENST00000622697 OR4A47Q6IF82 309 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 WISP1O95388 367 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 ICAM4Q14773 271 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 LINC01560Q8TB33 94 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 FOXD3Q9UJU5 478 aaPredicted RBP13.59□□□□□ -0.23
GABRB3-215ENST00000622697 TMEM250H0YL14 139 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 TCF21O43680 179 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 MT-ND6P03923 174 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 NRN1LQ496H8 165 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 GLRX5Q86SX6 157 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 TMEM189A5PLL7 270 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 FAM166AQ6J272 317 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 OR5R1Q8NH85 324 aa13.59□□□□□ -0.23
GABRB3-215ENST00000622697 J3QR89 54 aa13.58□□□□□ -0.23
GABRB3-215ENST00000622697 RPL7P18124 248 aaKnown RBP13.58□□□□□ -0.23
GABRB3-215ENST00000622697 VSIRQ9H7M9 311 aa13.58□□□□□ -0.23
GABRB3-215ENST00000622697 HLA-DQA1P01909 254 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 AMY1AP04745 511 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 SOD3P08294 240 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 GLRXP35754 106 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 NMUP48645 174 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 OR51G1Q8NGK1 321 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 CYTL1Q9NRR1 136 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 J3QW42 95 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 IFNL4K9M1U5 179 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 MPZP25189 248 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 ZFP36L1Q07352 338 aaKnown RBP13.58□□□□□ -0.24
GABRB3-215ENST00000622697 SPANXN1Q5VSR9 72 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 ZCCHC24Q8N2G6 241 aaKnown RBP13.58□□□□□ -0.24
GABRB3-215ENST00000622697 CCDC144NLQ6NUI1 221 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 GGNQ86UU5 652 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 C17orf82Q86X59 251 aaPredicted RBP13.58□□□□□ -0.24
GABRB3-215ENST00000622697 PNKDQ8N490 385 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 OR9G1Q8NH87 305 aa13.58□□□□□ -0.24
GABRB3-215ENST00000622697 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.24
GABRB3-215ENST00000622697 ZNF841Q6ZN19 808 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 GATAD1Q8WUU5 269 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 LINC00305Q7Z4B0 112 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 SRSF12Q8WXF0 261 aaKnown RBP13.57□□□□□ -0.24
GABRB3-215ENST00000622697 TMEM208Q9BTX3 173 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 SFXN3Q9BWM7 321 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 GSN-AS1Q9NRJ2 163 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 LHFPL1Q86WI0 220 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 BPIFA4PQ86YQ2 179 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 REG4Q9BYZ8 158 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 DMRT1Q9Y5R6 373 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 NLRC5Q86WI3 1866 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 IGHV1-69-2A0A0G2JMI3 117 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 PRR19A6NJB7 356 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 C21orf62-AS1Q17RA5 79 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 TIMM23BQ5SRD1 257 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 SDF2L1Q9HCN8 221 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 C1QTNF9BB2RNN3 333 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 TMEM183AQ8IXX5 376 aa13.57□□□□□ -0.24
GABRB3-215ENST00000622697 A0A1B0GV90 55 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 OR4C46A6NHA9 309 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 BMI1P35226 326 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 IQCF6A8MYZ5 107 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 RPL24P83731 157 aaKnown RBP13.56□□□□□ -0.24
GABRB3-215ENST00000622697 GOLT1AQ6ZVE7 132 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 TFPI2P48307 235 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 SPRR3Q9UBC9 169 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 CYP2G1PQ6ZSU1 146 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 MIR17HGQ75NE6 70 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 UQCRFS1P47985 274 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 FOXA3P55318 350 aaPredicted RBP13.56□□□□□ -0.24
GABRB3-215ENST00000622697 SCGB1D4Q6XE38 83 aa13.56□□□□□ -0.24
GABRB3-215ENST00000622697 ROS1P08922 2347 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 IGHV3OR16-13A0A075B7E8 117 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 IGHV3-74A0A0B4J1X5 117 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 ZNF497Q6ZNH5 498 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 AKAP6Q13023 2319 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 IGHV3-23P01764 117 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 ZNF324BQ6AW86 544 aaPredicted RBP13.55□□□□□ -0.24
GABRB3-215ENST00000622697 UNQ5815/PRO19632Q6UWF5 114 aa13.55□□□□□ -0.24
GABRB3-215ENST00000622697 TMEM186Q96B77 213 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms