RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 C4orf17Q53FE4 359 aa9.82□□□□□ -0.84
TP53-227ENST00000622645 C16orf82Q7Z2V1 217 aa9.82□□□□□ -0.84
TP53-227ENST00000622645 ABHD5Q8WTS1 349 aa9.82□□□□□ -0.84
TP53-227ENST00000622645 SSMEM1Q8WWF3 244 aa9.82□□□□□ -0.84
TP53-227ENST00000622645 C1orf159Q96HA4 380 aa9.82□□□□□ -0.84
TP53-227ENST00000622645 RAB9BQ9NP90 201 aa9.82□□□□□ -0.84
TP53-227ENST00000622645 PKDREJQ9NTG1 2253 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 TRBV23-1A0A0A0MS06 115 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 SEC14L6B5MCN3 397 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 LY86O95711 162 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 RD3LP0DJH9 198 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 S100PP25815 95 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 TMPRSS3P57727 454 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 HSPE1P61604 102 aaKnown RBP9.81□□□□□ -0.84
TP53-227ENST00000622645 BSPH1Q075Z2 132 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.81□□□□□ -0.84
TP53-227ENST00000622645 FRZBQ92765 325 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 GGTLC1Q9BX51 225 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 CTDSP1Q9GZU7 261 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 TMEM14BQ9NUH8 114 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 PXMP4Q9Y6I8 212 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 ZNF729A6NN14 1252 aaPredicted RBP9.81□□□□□ -0.84
TP53-227ENST00000622645 THBDP07204 575 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 CT45A6P0DMU7 189 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 CT45A5P0DMU8 189 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 CT45A7P0DMV0 189 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 OPRK1P41145 380 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 ATP5G3P48201 142 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 CLEC12BQ2HXU8 276 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 ARSJQ5FYB0 599 aaPredicted RBP9.81□□□□□ -0.84
TP53-227ENST00000622645 GFI1BQ5VTD9 330 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 TEX36Q5VZQ5 186 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 CST9LP1Q5W188 147 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 Q8NA96 180 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 OR5T1Q8NG75 326 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 NEIL1Q96FI4 390 aaPredicted RBP9.81□□□□□ -0.84
TP53-227ENST00000622645 RPUSD1Q9UJJ7 312 aaKnown RBP9.81□□□□□ -0.84
TP53-227ENST00000622645 CUL9Q8IWT3 2517 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 TNCP24821 2201 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 KALRNO60229 2985 aa9.81□□□□□ -0.84
TP53-227ENST00000622645 TRGV8A0A0C4DH27 118 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 SRRM4A7MD48 611 aaKnown RBP9.8□□□□□ -0.84
TP53-227ENST00000622645 C17orf100A8MU93 164 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 MPDU1O75352 247 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 CA2P00918 260 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 IGHV2-70P01814 119 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 TRGC1P0CF51 173 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 PYY3Q5JQD4 70 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 CDPF1Q6NVV7 123 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 SLC24A4Q8NFF2 622 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 RND1Q92730 232 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 FOXA2Q9Y261 457 aaPredicted RBP9.8□□□□□ -0.84
TP53-227ENST00000622645 TANC2Q9HCD6 1990 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 TRBV24-1A0A075B6N3 115 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 TNFRSF1AP19438 455 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 NPY1RP25929 384 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 FAM209BQ5JX69 171 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 GFRALQ6UXV0 394 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 SLC25A48Q6ZT89 311 aaKnown RBP9.8□□□□□ -0.84
TP53-227ENST00000622645 LINC00574Q9H8X3 128 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 NPVFQ9HCQ7 196 aa9.8□□□□□ -0.84
TP53-227ENST00000622645 AURKAIP1Q9NWT8 199 aaPredicted RBP9.8□□□□□ -0.84
TP53-227ENST00000622645 LSM4Q9Y4Z0 139 aaKnown RBP9.8□□□□□ -0.84
TP53-227ENST00000622645 hADV38S2A0JD32 116 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 FCN3O75636 299 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 PFN1P07737 140 aaKnown RBP9.79□□□□□ -0.84
TP53-227ENST00000622645 ARL14EPLP0DKL9 152 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 CCL3L1P16619 93 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 NBL1P41271 181 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 PRR30Q53SZ7 412 aaPredicted RBP9.79□□□□□ -0.84
TP53-227ENST00000622645 OR13D1Q8NGV5 346 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 CORO2AQ92828 525 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 RAB1CQ92928 201 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 ADTRPQ96IZ2 230 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 TMEM204Q9BSN7 226 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 DERL1Q9BUN8 251 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 ELOVL1Q9BW60 279 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 SLC25A10Q9UBX3 287 aaPredicted RBP9.79□□□□□ -0.84
TP53-227ENST00000622645 OR51B2Q9Y5P1 312 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 H7BYZ3 331 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 HRASP01112 189 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 S100A2P29034 98 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 GNB1P62873 340 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 RPL31P62899 125 aaKnown RBP9.79□□□□□ -0.84
TP53-227ENST00000622645 CCL17Q92583 94 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 ENY2Q9NPA8 101 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 SLC35D1Q9NTN3 355 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 GAR1Q9NY12 217 aaKnown RBP9.79□□□□□ -0.84
TP53-227ENST00000622645 NDUFB4O95168 129 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 SOD3P08294 240 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 FAM122AQ96E09 287 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 GPR61Q9BZJ8 451 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 SEPSECSQ9HD40 501 aaKnown RBP9.79□□□□□ -0.84
TP53-227ENST00000622645 ELOVL5Q9NYP7 299 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 LINC00312Q9Y6C7 94 aa9.79□□□□□ -0.84
TP53-227ENST00000622645 J3QR06 171 aa9.78□□□□□ -0.84
TP53-227ENST00000622645 PHOX2AO14813 284 aa9.78□□□□□ -0.84
TP53-227ENST00000622645 SOX15O60248 233 aa9.78□□□□□ -0.84
TP53-227ENST00000622645 IL6RP08887 468 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms