RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PMS2P5A8MQ11 134 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 VWC2LB2RUY7 222 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 SLC25A17O43808 307 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 DVL1P1P54792 670 aaPredicted RBP17.31■□□□□ 0.36
SPAST-204ENST00000621856 RPL8P62917 257 aaKnown RBP17.31■□□□□ 0.36
SPAST-204ENST00000621856 BLOC1S1P78537 153 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 PRCDQ00LT1 54 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 AANATQ16613 207 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 LDLRAD2Q5SZI1 272 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 REG4Q9BYZ8 158 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 PLEKHA3Q9HB20 300 aa17.31■□□□□ 0.36
SPAST-204ENST00000621856 UBE2L5PA0A1B0GUS4 154 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 RNASEK-C17orf49H0YIS7 233 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 PRH1P02810 166 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 COL8A1P27658 744 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 THNSL2Q86YJ6 484 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 OR5B3Q8NH48 314 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 RITA1Q96K30 269 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 TMEM147Q9BVK8 224 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 COMMD5Q9GZQ3 224 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 HILPDAQ9Y5L2 63 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 RFNGQ9Y644 331 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 IGHV4-30-2A0A087WSY4 118 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 MFSD2BA6NFX1 497 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 FAM157AC9JC47 383 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 PXDC1Q5TGL8 231 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 ZNF787Q6DD87 383 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 Q6ZRG5 221 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 LHFPL4Q7Z7J7 247 aa17.3■□□□□ 0.36
SPAST-204ENST00000621856 TIMM23O14925 209 aa17.29■□□□□ 0.36
SPAST-204ENST00000621856 CAMLGP49069 296 aa17.29■□□□□ 0.36
SPAST-204ENST00000621856 RAB5CP51148 216 aa17.29■□□□□ 0.36
SPAST-204ENST00000621856 LGALS4P56470 323 aa17.29■□□□□ 0.36
SPAST-204ENST00000621856 RAB11AP62491 216 aa17.29■□□□□ 0.36
SPAST-204ENST00000621856 LRRC75BQ2VPJ9 315 aa17.29■□□□□ 0.36
SPAST-204ENST00000621856 OR1L8Q8NGR8 309 aa17.29■□□□□ 0.36
SPAST-204ENST00000621856 UQCC1Q9NVA1 299 aa17.29■□□□□ 0.36
SPAST-204ENST00000621856 I3L521 148 aa17.28■□□□□ 0.36
SPAST-204ENST00000621856 RRHO14718 337 aa17.28■□□□□ 0.36
SPAST-204ENST00000621856 DSCR9P59020 149 aa17.28■□□□□ 0.36
SPAST-204ENST00000621856 ETV3LQ6ZN32 361 aa17.28■□□□□ 0.36
SPAST-204ENST00000621856 SLC24A4Q8NFF2 622 aa17.28■□□□□ 0.36
SPAST-204ENST00000621856 PARD6GQ9BYG4 376 aaPredicted RBP17.28■□□□□ 0.36
SPAST-204ENST00000621856 WDR61Q9GZS3 305 aaKnown RBP17.28■□□□□ 0.36
SPAST-204ENST00000621856 HRH4Q9H3N8 390 aa17.28■□□□□ 0.36
SPAST-204ENST00000621856 ZNF430Q9H8G1 570 aaPredicted RBP17.28■□□□□ 0.36
SPAST-204ENST00000621856 PARP11Q9NR21 331 aa17.28■□□□□ 0.36
SPAST-204ENST00000621856 KMT2BQ9UMN6 2715 aaPredicted RBP17.28■□□□□ 0.36
SPAST-204ENST00000621856 PAX1P15863 534 aa17.27■□□□□ 0.36
SPAST-204ENST00000621856 NPY1RP25929 384 aa17.27■□□□□ 0.36
SPAST-204ENST00000621856 HSD17B13Q7Z5P4 300 aaPredicted RBP17.27■□□□□ 0.36
SPAST-204ENST00000621856 TEX45Q8NA69 505 aa17.27■□□□□ 0.36
SPAST-204ENST00000621856 TBX15Q96SF7 602 aa17.27■□□□□ 0.36
SPAST-204ENST00000621856 POLR3KQ9Y2Y1 108 aaPredicted RBP17.27■□□□□ 0.36
SPAST-204ENST00000621856 LRRK2Q5S007 2527 aa17.27■□□□□ 0.36
SPAST-204ENST00000621856 UTP20O75691 2785 aaKnown RBP17.27■□□□□ 0.35
SPAST-204ENST00000621856 UMAD1C9J7I0 102 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 IFNA4P05014 189 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 PLA2G2AP14555 144 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 CNTFRP26992 372 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 F2RL1P55085 397 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 MINOS1Q5TGZ0 78 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 MARC2Q969Z3 335 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 RSG1Q9BU20 258 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 TPSG1Q9NRR2 321 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 MINOS1-NBL1R4GNA1 71 aa17.27■□□□□ 0.35
SPAST-204ENST00000621856 TRIM77I1YAP6 450 aa17.26■□□□□ 0.35
SPAST-204ENST00000621856 J3QKU1 62 aa17.26■□□□□ 0.35
SPAST-204ENST00000621856 ZNF616Q08AN1 781 aa17.26■□□□□ 0.35
SPAST-204ENST00000621856 PSG5Q15238 335 aa17.26■□□□□ 0.35
SPAST-204ENST00000621856 AKR1C8PQ5T2L2 129 aa17.26■□□□□ 0.35
SPAST-204ENST00000621856 FAM213BQ8TBF2 198 aa17.26■□□□□ 0.35
SPAST-204ENST00000621856 TAF15Q92804 592 aaKnown RBP eCLIP17.26■□□□□ 0.35
SPAST-204ENST00000621856 FBXO7Q9Y3I1 522 aa17.26■□□□□ 0.35
SPAST-204ENST00000621856 TNCP24821 2201 aa17.26■□□□□ 0.35
SPAST-204ENST00000621856 WNK2Q9Y3S1 2297 aa17.25■□□□□ 0.35
SPAST-204ENST00000621856 CA2P00918 260 aa17.25■□□□□ 0.35
SPAST-204ENST00000621856 CD1BP29016 333 aa17.25■□□□□ 0.35
SPAST-204ENST00000621856 SSX2Q16385 188 aa17.25■□□□□ 0.35
SPAST-204ENST00000621856 CCDC144NLQ6NUI1 221 aa17.25■□□□□ 0.35
SPAST-204ENST00000621856 RNF5Q99942 180 aa17.25■□□□□ 0.35
SPAST-204ENST00000621856 NDUFA4L2Q9NRX3 87 aa17.25■□□□□ 0.35
SPAST-204ENST00000621856 VENTXO95231 258 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 FGF7P21781 194 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 FHITP49789 147 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 MMD2Q8IY49 270 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 TMEM170AQ8WVE7 144 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 CFHR4Q92496 578 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 FAM210AQ96ND0 272 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 METTL1Q9UBP6 276 aaKnown RBP17.24■□□□□ 0.35
SPAST-204ENST00000621856 A0A1W2PN81 502 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 OOSP1A8MZH6 123 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 PAX6P26367 422 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 CHRNA7P36544 502 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 UBE2E1P51965 193 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 PJVKQ0ZLH3 352 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 CLEC12BQ2HXU8 276 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 VWC2Q2TAL6 325 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 TOR2AQ5JU69 321 aa17.24■□□□□ 0.35
SPAST-204ENST00000621856 C10orf55Q5SWW7 151 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms