RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 LCNL1Q6ZST4 164 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 OR10P1Q8NGE3 313 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 CLDND2Q8NHS1 167 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 RXFP4Q8TDU9 374 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 F8P00451 2351 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 TRBV6-6A0A0A6YYG2 114 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 APOA2P02652 100 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 PPOXP50336 477 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 RAB2AP61019 212 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 SSTP61278 116 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 RTL8BQ17RB0 113 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 TEX36Q5VZQ5 186 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 MIC13Q5XKP0 118 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 OR4S2Q8NH73 311 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 FAM216AQ8WUB2 273 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 TMEM133Q9H2Q1 129 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 IFT22Q9H7X7 185 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 PUS1Q9Y606 427 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS11-208ENST00000621676 AREGP15514 252 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 HTD2P86397 168 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 PRR31Q5SQ13 230 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 ZNF841Q6ZN19 808 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 VMO1Q7Z5L0 202 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 C1orf174Q8IYL3 243 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 C11orf42Q8N5U0 333 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 RNF141Q8WVD5 230 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 MS4A10Q96PG2 267 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 AQP10Q96PS8 301 aa8.54□□□□□ -1.04
VPS11-208ENST00000621676 LYRM2Q9NU23 88 aaPredicted RBP8.54□□□□□ -1.04
VPS11-208ENST00000621676 TRAV40A0A0B4J280 105 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 MDFIC2A0A1B0GVS7 189 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 NPIPB11E5RHQ5 1161 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 RNF223E7ERA6 249 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 HPRT1P00492 218 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 CA2P00918 260 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 OR8U8P0C7N1 319 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 GUCA2BQ16661 112 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 FAM120AOSQ5T036 256 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 FAM222BQ8WU58 562 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 FAM168AQ92567 244 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 UHRF2Q96PU4 802 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 PBDC1Q9BVG4 233 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 DSCAML1Q8TD84 2053 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 A0A1B0GU03 582 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 M0R036 132 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 JTBO76095 146 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 CGB3P0DN86 165 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 CGB7P0DN87 165 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 COX6B1P14854 86 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 ZNF439Q8NDP4 499 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 DIRC2Q96SL1 478 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 HIPK2Q9H2X6 1198 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 RPRMQ9NS64 109 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 METTL1Q9UBP6 276 aaKnown RBP8.53□□□□□ -1.04
VPS11-208ENST00000621676 URGCP-MRPS24S4R325 110 aa8.53□□□□□ -1.04
VPS11-208ENST00000621676 OTOGQ6ZRI0 2925 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 IGHV2-70P01814 119 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 AGAP20933 346 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 OPRK1P41145 380 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 SSBP2P81877 361 aaPredicted RBP8.52□□□□□ -1.04
VPS11-208ENST00000621676 TMEM155Q4W5P6 130 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 LEMD1Q68G75 181 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 SLC25A48Q6ZT89 311 aaKnown RBP8.52□□□□□ -1.04
VPS11-208ENST00000621676 OR9G1Q8NH87 305 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 OR5B12Q96R08 314 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 SLC25A31Q9H0C2 315 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 ZNF430Q9H8G1 570 aaPredicted RBP8.52□□□□□ -1.04
VPS11-208ENST00000621676 RHOFQ9HBH0 211 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 RPH3ALQ9UNE2 315 aa8.52□□□□□ -1.04
VPS11-208ENST00000621676 IGHV3-49A0A0A0MS15 119 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 F2RL2O00254 374 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 MOSP00540 346 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 TGFAP01135 160 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 LIPFP07098 398 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 CLLU1Q5K131 121 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 Q6ZS49 121 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 TSNAXQ99598 290 aaKnown RBP8.52□□□□□ -1.05
VPS11-208ENST00000621676 AIFM2Q9BRQ8 373 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 TRAF4Q9BUZ4 470 aaPredicted RBP8.52□□□□□ -1.05
VPS11-208ENST00000621676 PLEKHA2Q9HB19 425 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 GAB2Q9UQC2 676 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 OR10J4P0C629 311 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 P2RY1P47900 373 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 RAB7AP51149 207 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 SSX7Q7RTT5 188 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 Q8N7P7 452 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 ASCL2Q99929 193 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 CLEC7AQ9BXN2 247 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 PLEKHA3Q9HB20 300 aa8.52□□□□□ -1.05
VPS11-208ENST00000621676 YIF1AO95070 293 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 SULT1A1P50225 295 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 RND3P61587 244 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 RELBQ01201 579 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 ECSCRQ19T08 205 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 PDLIM3Q53GG5 364 aaPredicted RBP8.51□□□□□ -1.05
VPS11-208ENST00000621676 CST9LP1Q5W188 147 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 BTNL8Q6UX41 500 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 ZNF709Q8N972 641 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 IGKV3-7A0A075B6H7 116 aa8.51□□□□□ -1.05
VPS11-208ENST00000621676 H0YJW9 148 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 360 ms