RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 OPN1MWP04001 364 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 OPN1MW2P0DN77 364 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 OPN1MW3P0DN78 364 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 HLA-GP17693 338 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 MAS1LP35410 378 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 INPP1P49441 399 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 TMEM267Q0VDI3 215 aaPredicted RBP11.15□□□□□ -0.62
CBWD3-217ENST00000621474 C2orf68Q2NKX9 166 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 SLC25A21Q9BQT8 299 aaPredicted RBP11.15□□□□□ -0.62
CBWD3-217ENST00000621474 NSG2Q9Y328 171 aa11.15□□□□□ -0.62
CBWD3-217ENST00000621474 A0A0G2JRQ6 117 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 TEX13DA0A0J9YY54 714 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-217ENST00000621474 NAP1L6A6NFF2 107 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 HMX3A6NHT5 357 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 ACTL6BO94805 426 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 SERPINE2P07093 398 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 RAB9AP51151 201 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 ERVK-16P61578 105 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 IFITM3Q01628 133 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
CBWD3-217ENST00000621474 IZUMO4Q1ZYL8 232 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 CXorf66Q5JRM2 361 aaPredicted RBP11.14□□□□□ -0.63
CBWD3-217ENST00000621474 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 OR5M8Q8NGP6 311 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 SCGB3A2Q96PL1 93 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
CBWD3-217ENST00000621474 PRR13Q9NZ81 148 aa11.14□□□□□ -0.63
CBWD3-217ENST00000621474 RBMXL2O75526 392 aaKnown RBP11.13□□□□□ -0.63
CBWD3-217ENST00000621474 B3GALNT1O75752 331 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 NDUFB6O95139 128 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 AKR1C4P17516 323 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 RPL27AP46776 148 aaKnown RBP11.13□□□□□ -0.63
CBWD3-217ENST00000621474 OR2B8PP59922 312 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TMEM187Q14656 261 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 ZNF491Q8N8L2 437 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 OR5T1Q8NG75 326 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TMEM68Q96MH6 324 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 SPIN2AQ99865 258 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 SPIN2BQ9BPZ2 258 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 WDR12Q9GZL7 423 aaKnown RBP11.13□□□□□ -0.63
CBWD3-217ENST00000621474 ZFP57Q9NU63 452 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TBC1D24Q9ULP9 559 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 C15orf61A6NNL5 157 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 LYRM1O43325 122 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 PF4V1P10720 104 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 AREGP15514 252 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 CDX1P47902 265 aaPredicted RBP11.13□□□□□ -0.63
CBWD3-217ENST00000621474 DHODHQ02127 395 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 ZNF846Q147U1 533 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TRIM16LQ309B1 348 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 ETV3LQ6ZN32 361 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 C19orf35Q6ZS72 473 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TMED4Q7Z7H5 227 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TMEM56Q96MV1 263 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 PHB2Q99623 299 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TMEM14BQ9NUH8 114 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
CBWD3-217ENST00000621474 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 IGLC7A0M8Q6 106 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 BRI3O95415 125 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 TMEM128Q5BJH2 165 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 C8orf86Q6ZUL3 223 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 SGPP2Q8IWX5 399 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 SELENOHQ8IZQ5 122 aaKnown RBP11.12□□□□□ -0.63
CBWD3-217ENST00000621474 TTC9CQ8N5M4 171 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 FAM110DQ8TAY7 271 aaPredicted RBP11.12□□□□□ -0.63
CBWD3-217ENST00000621474 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 FYTTD1Q96QD9 318 aaKnown RBP11.12□□□□□ -0.63
CBWD3-217ENST00000621474 GNB4Q9HAV0 340 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 FLVCR2Q9UPI3 526 aa11.12□□□□□ -0.63
CBWD3-217ENST00000621474 NOTCH3Q9UM47 2321 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 A0A0B4J293 547 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 UPK1BO75841 260 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 SLC6A1P30531 599 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 DEFA5Q01523 94 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 DEFB136Q30KP8 78 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 TREML4Q6UXN2 200 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 Q6ZRM9 215 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 H2BFWTQ7Z2G1 175 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 ZNF695Q8IW36 515 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 OR10W1Q8NGF6 305 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 RBPMSQ93062 196 aaKnown RBP11.11□□□□□ -0.63
CBWD3-217ENST00000621474 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 COMMD5Q9GZQ3 224 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 NDUFA4L2Q9NRX3 87 aa11.11□□□□□ -0.63
CBWD3-217ENST00000621474 CENPXA8MT69 81 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 H3BUA1 57 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 I3L521 148 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 PRH1P02810 166 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 AKR1C2P52895 323 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 WT1-ASQ06250 92 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 PPP1R1AQ13522 171 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 TMEM65Q6PI78 240 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 SLC25A42Q86VD7 318 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 CENPSQ8N2Z9 138 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 C4orf3Q8WVX3 66 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 TSC22D3Q99576 134 aa11.1□□□□□ -0.63
CBWD3-217ENST00000621474 QTRT1Q9BXR0 403 aaKnown RBP11.1□□□□□ -0.63
CBWD3-217ENST00000621474 PRNDQ9UKY0 176 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms