RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 KBTBD11-OT1A0A1B0GTJ5 212 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 SHISA3A0PJX4 238 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 B4DSR2 109 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 LRP11Q86VZ4 500 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 GPR82Q96P67 336 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 TRGC1P0CF51 173 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 EGR4Q05215 589 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 RPL39P5Q59GN2 51 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 MIC13Q5XKP0 118 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 GPR132Q9UNW8 380 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 TRBV5-7A0A0A0MS05 114 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 C9JCJ5 164 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 NPFFO15130 113 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 CIDEAO60543 219 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 APCSP02743 223 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 PRSS8Q16651 343 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 STHQ8IWL8 128 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 LINC01587Q99440 93 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 C8orf88P0DMB2 117 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 CKS2P33552 79 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF385CQ66K41 422 aaPredicted RBP8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 CLEC19AQ6UXS0 136 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 DMRT1Q9Y5R6 373 aa8.28□□□□□ -1.08
CLTCL1-211ENST00000621271 LOC389332A0A1B0GUA5 103 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 LYNX1G3V0Z9 82 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 CELA3BP08861 270 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 LYNX1P0DP58 116 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 SPTBP11277 2137 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 CD99P14209 185 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 SRD5A1P18405 259 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 MFAP2P55001 183 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 C2orf83Q53S99 150 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 SAMD13Q5VXD3 122 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF880Q6PDB4 577 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 C12orf54Q6X4T0 127 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 CYB561D1Q8N8Q1 229 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 COL6A6A6NMZ7 2263 aa8.27□□□□□ -1.08
CLTCL1-211ENST00000621271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 IGHV3-66A0A0C4DH42 116 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 IQCF6A8MYZ5 107 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 IGHV3-48P01763 117 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 FAM3BP58499 235 aaPredicted RBP8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 UBE2DNLQ8IWF7 75 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 H1FOOQ8IZA3 346 aaPredicted RBP8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 CLDND2Q8NHS1 167 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 GPR146Q96CH1 333 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 CD8AP01732 235 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 IER3P46695 156 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 TNFRSF9Q07011 255 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 SP5Q6BEB4 398 aaPredicted RBP8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 DRAM1Q8N682 238 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 TMEM252Q8N6L7 170 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 TMEM101Q96IK0 257 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 SPRR3Q9UBC9 169 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 DEPPQ9NTK1 212 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 AURKAIP1Q9NWT8 199 aaPredicted RBP8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 S4R3C0 116 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 FOXI3A8MTJ6 420 aaPredicted RBP8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 H7C1H1 209 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 TRGC2P03986 189 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 WNT2P09544 360 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 TXNDC17Q9BRA2 123 aa8.27□□□□□ -1.09
CLTCL1-211ENST00000621271 TTC28Q96AY4 2481 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 C12orf77C9JDV5 145 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 BCL2P10415 239 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 DDTP30046 118 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 ABLIM2Q6H8Q1 611 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 ZCCHC24Q8N2G6 241 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 HIST1H2BAQ96A08 127 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 NBR2O15453 112 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 HSPB1P04792 205 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 CDX1P47902 265 aaPredicted RBP8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 C19orf24Q9BVV8 132 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 H3BTX0 84 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 LDLRAD2Q5SZI1 272 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 C1QTNF5Q9BXJ0 243 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 FOXA2Q9Y261 457 aaPredicted RBP8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 CARHSP1Q9Y2V2 147 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 AMY1AP04745 511 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 RUNX1Q01196 453 aa8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
CLTCL1-211ENST00000621271 H0YL77 283 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 TGFBR3LH3BV60 316 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 P2RY4P51582 365 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 PAPPA-AS1Q5QFB9 102 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 WFIKKN1Q96NZ8 548 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 CXorf65A6NEN9 183 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 GCGP01275 180 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 CD74P04233 296 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 ZNF672Q499Z4 452 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 SAPCD1Q5SSQ6 148 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 IBA57Q5T440 356 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 SELENOHQ8IZQ5 122 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 RAB24Q969Q5 203 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 GPHA2Q96T91 129 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms