RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 STHQ8IWL8 128 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 IFI27L2Q9H2X8 130 aa9.59□□□□□ -0.87
CLIP1-219ENST00000620786 IGHV3OR16-8A0A075B7F1 116 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 HSPB1P04792 205 aaKnown RBP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 KLK2P20151 261 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 SMUG1Q53HV7 270 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 C8orf46Q8TAG6 207 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 SIPA1L1O43166 1804 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 NPIPB9F8W1W9 429 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 H7C2G1 150 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 NBR2O15453 112 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 EIF3GO75821 320 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 RPS11P62280 158 aaKnown RBP eCLIP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 MEF2BQ02080 365 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 ICAM4Q14773 271 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 LTBP1Q14766 1721 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 LGALS3P17931 250 aaKnown RBP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 MEIG1Q5JSS6 88 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 TEX45Q8NA69 505 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 KLK15Q9H2R5 256 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 RALGAPA2Q2PPJ7 1873 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 ATP5IP56385 69 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 MBNL2Q5VZF2 373 aaKnown RBP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 SPSB4Q96A44 273 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 RNASE4P34096 147 aaKnown RBP9.58□□□□□ -0.88
CLIP1-219ENST00000620786 ASIPP42127 132 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 FOXF2Q12947 444 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 WNT10AQ9GZT5 417 aa9.58□□□□□ -0.88
CLIP1-219ENST00000620786 A0A0G2JK05 382 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 PSMB11A5LHX3 300 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 A6NDN8 102 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 C17orf98A8MV24 154 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 IL6RP08887 468 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-219ENST00000620786 CYB5R2Q6BCY4 276 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 ATG101Q9BSB4 218 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 GEMIN7Q9H840 131 aaKnown RBP9.57□□□□□ -0.88
CLIP1-219ENST00000620786 TNFRSF18Q9Y5U5 241 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 PROB1E7EW31 1015 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 C1QL1O75973 258 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 CXCL2P19875 107 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 GTSCR1Q86UQ5 136 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 FLVCR1-AS1Q8TAF5 88 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 KIR2DL4Q99706 377 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 PRSS2P07478 247 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 MSGN1A6NI15 193 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 RRHO14718 337 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 MDKP21741 143 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-219ENST00000620786 CD24P25063 80 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 FAM3BP58499 235 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-219ENST00000620786 CD300CQ08708 224 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 LDLRAD2Q5SZI1 272 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 VN1R17PQ8TDU5 208 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 WFIKKN1Q96NZ8 548 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 DMRTA2Q96SC8 542 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 SH3BGRL3Q9H299 93 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 PQLC2LA1A4F0 135 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 TM2D1Q9BX74 207 aa9.57□□□□□ -0.88
CLIP1-219ENST00000620786 GREB1LQ9C091 1923 aaPredicted RBP9.57□□□□□ -0.88
CLIP1-219ENST00000620786 ZNF236Q9UL36 1845 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 HLA-DRB1P01911 266 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 TIMP3P35625 211 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 TAS2R60P59551 318 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 TMEM133Q9H2Q1 129 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 PDCD11Q14690 1871 aaKnown RBP9.56□□□□□ -0.88
CLIP1-219ENST00000620786 MYOD1P15172 320 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 TFF1P04155 84 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 GCHFRP30047 84 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 FAM166AQ6J272 317 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 CD200R1LQ6Q8B3 271 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 SAA2-SAA4A0A096LPE2 208 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 SAA2P0DJI9 122 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-219ENST00000620786 C20orf204Q6ZNR8 217 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 SMDT1Q9H4I9 107 aa9.56□□□□□ -0.88
CLIP1-219ENST00000620786 NUP214P35658 2090 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-219ENST00000620786 C7orf66A4D0T2 115 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 DIRC3C9JPN6 131 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 H7C1H1 209 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 ANKRD36A6QL64 1941 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 MT-ND6P03923 174 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 EFNA4P52798 201 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 CIRBPQ14011 172 aaKnown RBP9.55□□□□□ -0.88
CLIP1-219ENST00000620786 WDR82Q6UXN9 313 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 M0R381 172 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 SUMO2P61956 95 aaKnown RBP9.55□□□□□ -0.88
CLIP1-219ENST00000620786 ARL6IP6Q8N6S5 226 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 PLPPR1Q8TBJ4 325 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 GATAD1Q8WUU5 269 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 SLC25A28Q96A46 364 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 IL18BPO95998 194 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 WNT2P09544 360 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 IGFBP2P18065 325 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 FBLIM1Q8WUP2 373 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 ZMAT5Q9UDW3 170 aaKnown RBP9.55□□□□□ -0.88
CLIP1-219ENST00000620786 MYOFQ9NZM1 2061 aa9.55□□□□□ -0.88
CLIP1-219ENST00000620786 TRBV20OR9-2A0A075B6H5 130 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms