RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 INSIG2Q9Y5U4 225 aa17.51■□□□□ 0.39
SGMS1-210ENST00000619438 MARCH11A6NNE9 402 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 NUPL2O15504 423 aaKnown RBP17.5■□□□□ 0.39
SGMS1-210ENST00000619438 SCAF4O95104 1147 aaKnown RBP17.5■□□□□ 0.39
SGMS1-210ENST00000619438 HBE1P02100 147 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 SERF2P84101 59 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 LTC4SQ16873 150 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 SPANXN5Q5MJ07 72 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 SLC25A24Q6NUK1 477 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 THNSL2Q86YJ6 484 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 CLRN3Q8NCR9 226 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 ABHD14AQ9BUJ0 271 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 EIF5A2Q9GZV4 153 aaKnown RBP17.5■□□□□ 0.39
SGMS1-210ENST00000619438 KIAA1456Q9P272 454 aa17.5■□□□□ 0.39
SGMS1-210ENST00000619438 ZNF729A6NN14 1252 aaPredicted RBP17.49■□□□□ 0.39
SGMS1-210ENST00000619438 NPBWR1P48145 328 aa17.49■□□□□ 0.39
SGMS1-210ENST00000619438 ZNF134P52741 427 aa17.49■□□□□ 0.39
SGMS1-210ENST00000619438 ZNF841Q6ZN19 808 aa17.49■□□□□ 0.39
SGMS1-210ENST00000619438 R3HDM4Q96D70 268 aa17.49■□□□□ 0.39
SGMS1-210ENST00000619438 CCL13Q99616 98 aa17.49■□□□□ 0.39
SGMS1-210ENST00000619438 MDFIQ99750 246 aa17.49■□□□□ 0.39
SGMS1-210ENST00000619438 MEX3AA1L020 520 aaKnown RBP17.48■□□□□ 0.39
SGMS1-210ENST00000619438 SELLP14151 372 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 PPT1P50897 306 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 LILRB2Q8N423 598 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 WDR61Q9GZS3 305 aaKnown RBP17.48■□□□□ 0.39
SGMS1-210ENST00000619438 SLC35B3Q9H1N7 401 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 CTSZQ9UBR2 303 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 PRELID3BQ9Y3B1 194 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 DSCAML1Q8TD84 2053 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 M0R1X1 148 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 TNFRSF13BO14836 293 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-210ENST00000619438 RAB2AP61019 212 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 SLC38A11Q08AI6 406 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 TCF23Q7RTU1 214 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 CENPVQ7Z7K6 275 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-210ENST00000619438 DTD1Q8TEA8 209 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 DDB2Q92466 427 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 RBMXL1Q96E39 390 aaKnown RBP17.48■□□□□ 0.39
SGMS1-210ENST00000619438 TIMM9Q9Y5J7 89 aa17.48■□□□□ 0.39
SGMS1-210ENST00000619438 IGHV2-70DA0A0C4DH43 119 aa17.47■□□□□ 0.39
SGMS1-210ENST00000619438 DVL1O14640 695 aa17.47■□□□□ 0.39
SGMS1-210ENST00000619438 PDLIM3Q53GG5 364 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-210ENST00000619438 ZNF439Q8NDP4 499 aa17.47■□□□□ 0.39
SGMS1-210ENST00000619438 OR4C12Q96R67 309 aa17.47■□□□□ 0.39
SGMS1-210ENST00000619438 KAAG1Q9UBP8 84 aa17.47■□□□□ 0.39
SGMS1-210ENST00000619438 FBXO7Q9Y3I1 522 aa17.47■□□□□ 0.39
SGMS1-210ENST00000619438 NKX6-3A6NJ46 265 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 PMS2P5A8MQ11 134 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 FCGR3BO75015 233 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 ATF4P18848 351 aaPredicted RBP17.46■□□□□ 0.39
SGMS1-210ENST00000619438 LINC00205P59089 165 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 PAX8Q06710 450 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 CT45A1Q5HYN5 189 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 DUX4L9Q6RFH8 374 aaPredicted RBP17.46■□□□□ 0.39
SGMS1-210ENST00000619438 OR10A7Q8NGE5 316 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 OR52E5Q8NH55 327 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 CT45A3Q8NHU0 189 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 IDI2-AS1Q9NZ38 188 aa17.46■□□□□ 0.39
SGMS1-210ENST00000619438 RBFOX3A6NFN3 312 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 NDUFB3O43676 98 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 CCL20P78556 96 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 PAX2Q02962 417 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 TAF15Q92804 592 aaKnown RBP eCLIP17.45■□□□□ 0.38
SGMS1-210ENST00000619438 PINX1Q96BK5 328 aaKnown RBP17.45■□□□□ 0.38
SGMS1-210ENST00000619438 ADTRPQ96IZ2 230 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 S1PR3Q99500 378 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 GPR37O15354 613 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 TCF21O43680 179 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 ENSAO43768 121 aaKnown RBP17.45■□□□□ 0.38
SGMS1-210ENST00000619438 MEF2CQ06413 473 aaPredicted RBP17.45■□□□□ 0.38
SGMS1-210ENST00000619438 RPL39P5Q59GN2 51 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 FAM216BQ8N7L0 139 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 MBD3L1Q8WWY6 194 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 TMEM147Q9BVK8 224 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 LINC00312Q9Y6C7 94 aa17.45■□□□□ 0.38
SGMS1-210ENST00000619438 DOCK11Q5JSL3 2073 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 hADV38S2A0JD32 116 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 SLC31A2O15432 143 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 LIPFP07098 398 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 NQO2P16083 231 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 THBS3P49746 956 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 VWC2Q2TAL6 325 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 LRRC10Q5BKY1 277 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 ZNF251Q9BRH9 671 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 RSG1Q9BU20 258 aa17.44■□□□□ 0.38
SGMS1-210ENST00000619438 C22orf46C9J442 243 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 OR9G9P0C7N8 305 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 SPCS3P61009 180 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 ERVK-16P61578 105 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 ZNF506Q5JVG8 444 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 TMEM88Q6PEY1 159 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 OR10P1Q8NGE3 313 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 OR4S2Q8NH73 311 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 ZNF418Q8TF45 676 aaPredicted RBP17.43■□□□□ 0.38
SGMS1-210ENST00000619438 SFT2D1Q8WV19 159 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 UNKLQ9H9P5 680 aaKnown RBP17.43■□□□□ 0.38
SGMS1-210ENST00000619438 RPRMQ9NS64 109 aa17.43■□□□□ 0.38
SGMS1-210ENST00000619438 RPUSD1Q9UJJ7 312 aaKnown RBP17.43■□□□□ 0.38
SGMS1-210ENST00000619438 PAX6P26367 422 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms